Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
UPK1AO00322 MTND5P33-201ENST00000571250 1450 ntBASIC1.74□□□□□ -2.13
UPK1AO00322 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UPK1AO00322 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
UPK1AO00322 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.73□□□□□ -2.13
UPK1AO00322 RNU4-68P-201ENST00000364314 141 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 MIR676-201ENST00000390702 67 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 AC019129.1-201ENST00000403786 261 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 U6atac.2-201ENST00000408644 118 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 RN7SKP158-201ENST00000410453 326 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 RNU4-22P-201ENST00000411058 166 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.73□□□□□ -2.13
UPK1AO00322 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.73□□□□□ -2.13
UPK1AO00322 RSU1P2-202ENST00000437884 485 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 AC005094.1-201ENST00000440420 368 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.73□□□□□ -2.13
UPK1AO00322 AC124916.1-201ENST00000444020 547 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 FABP5P15-201ENST00000453566 214 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.73□□□□□ -2.13
UPK1AO00322 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.73□□□□□ -2.13
UPK1AO00322 RPL22P13-201ENST00000493291 347 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.73□□□□□ -2.13
UPK1AO00322 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UPK1AO00322 RNU6-64P-201ENST00000517119 105 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
UPK1AO00322 AP000907.2-201ENST00000530827 353 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.73□□□□□ -2.13
UPK1AO00322 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.73□□□□□ -2.13
UPK1AO00322 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.73□□□□□ -2.13
UPK1AO00322 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.73□□□□□ -2.13
UPK1AO00322 AC091152.3-201ENST00000604227 325 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 AF129408.1-201ENST00000608767 431 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 AC006386.1-201ENST00000619436 415 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 AL049777.1-201ENST00000622740 518 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 AC007490.1-201ENST00000624321 703 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 U6.99-201ENST00000637524 83 ntBASIC1.73□□□□□ -2.13
UPK1AO00322 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UPK1AO00322 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
UPK1AO00322 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
UPK1AO00322 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UPK1AO00322 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UPK1AO00322 SNORD114-1-201ENST00000362705 72 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AC119751.3-201ENST00000399720 670 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AL355143.1-201ENST00000407101 841 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 USP9YP6-201ENST00000413550 854 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AL356379.1-201ENST00000414105 126 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.72□□□□□ -2.13
UPK1AO00322 ISCA1P1-201ENST00000426679 387 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AL117351.1-201ENST00000438864 766 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.72□□□□□ -2.13
UPK1AO00322 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.72□□□□□ -2.13
UPK1AO00322 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.72□□□□□ -2.13
UPK1AO00322 OR6C5P-201ENST00000452388 923 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 KLF3P2-201ENST00000465138 268 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.72□□□□□ -2.13
UPK1AO00322 AC107393.1-201ENST00000512403 346 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.72□□□□□ -2.13
UPK1AO00322 RANP3-201ENST00000530970 276 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AL133241.1-201ENST00000556832 487 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AC110588.1-201ENST00000559699 137 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.72□□□□□ -2.13
UPK1AO00322 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.72□□□□□ -2.13
UPK1AO00322 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.72□□□□□ -2.13
UPK1AO00322 AC073544.2-201ENST00000601155 540 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.72□□□□□ -2.13
UPK1AO00322 AC112220.3-201ENST00000605502 502 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AC013412.1-201ENST00000610687 192 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AL161423.1-201ENST00000613700 262 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AL136313.1-201ENST00000624804 202 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 AL354685.2-201ENST00000448218 1447 ntBASIC1.72□□□□□ -2.13
UPK1AO00322 NACAP2-201ENST00000318548 624 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 SNORA4.1-201ENST00000364263 144 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.71□□□□□ -2.14
UPK1AO00322 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.71□□□□□ -2.14
UPK1AO00322 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
UPK1AO00322 AL139397.2-201ENST00000404529 772 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 NDUFS5P1-201ENST00000405668 289 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 MIR1305-201ENST00000408300 86 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 MIR1302-8-201ENST00000408342 128 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 RNA5SP270-201ENST00000411361 118 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1AO00322 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.71□□□□□ -2.14
UPK1AO00322 AL445685.2-201ENST00000422551 342 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AC003685.2-201ENST00000422795 395 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 RPS3AP44-201ENST00000425466 790 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1AO00322 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.71□□□□□ -2.14
UPK1AO00322 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.71□□□□□ -2.14
UPK1AO00322 AL136380.1-201ENST00000447970 162 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
UPK1AO00322 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1AO00322 snoU109.3-201ENST00000459477 145 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AP001324.2-201ENST00000461163 319 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 UBL5P3-201ENST00000475112 231 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.71□□□□□ -2.14
UPK1AO00322 CKS1BP2-201ENST00000497342 240 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms