Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 RNA5SP395-201ENST00000516567 118 ntBASIC4.72□□□□□ -1.65
RNF223E7ERA6 RNU6-158P-201ENST00000517104 100 ntBASIC4.72□□□□□ -1.65
RNF223E7ERA6 RNU1-104P-201ENST00000517280 175 ntBASIC4.72□□□□□ -1.65
RNF223E7ERA6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF223E7ERA6 SMG1P4-204ENST00000523028 4131 ntBASIC4.72□□□□□ -1.65
RNF223E7ERA6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF223E7ERA6 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF223E7ERA6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF223E7ERA6 NOL8P1-201ENST00000508336 3529 ntBASIC4.72□□□□□ -1.65
RNF223E7ERA6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF223E7ERA6 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC4.72□□□□□ -1.65
RNF223E7ERA6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF223E7ERA6 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF223E7ERA6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF223E7ERA6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.71□□□□□ -1.65
RNF223E7ERA6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.71□□□□□ -1.65
RNF223E7ERA6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
RNF223E7ERA6 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RNF223E7ERA6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.71□□□□□ -1.65
RNF223E7ERA6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF223E7ERA6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF223E7ERA6 AC004076.2-201ENST00000620532 3323 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF223E7ERA6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF223E7ERA6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RNF223E7ERA6 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 MIR518C-201ENST00000384822 101 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 AL121835.1-201ENST00000404250 354 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 RNA5SP504-201ENST00000410676 117 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 RNA5SP136-201ENST00000410906 107 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 AC092047.1-201ENST00000424997 240 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 MTATP6P21-201ENST00000440681 189 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF223E7ERA6 SNORD116-26-201ENST00000516006 96 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 RNA5SP153-201ENST00000516498 76 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 SNORA31.20-201ENST00000517111 133 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 AL161713.1-201ENST00000555538 145 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 MIR3136-201ENST00000583498 78 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 AL591034.3-201ENST00000605511 685 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 SNORD115-40-201ENST00000606510 82 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 AL138880.2-201ENST00000616214 239 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF223E7ERA6 MIR2052-201ENST00000636055 55 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 SNORD98-201ENST00000636377 67 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNF223E7ERA6 AC007159.1-201ENST00000566529 4706 ntBASIC4.71□□□□□ -1.66
RNF223E7ERA6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF223E7ERA6 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF223E7ERA6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF223E7ERA6 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNF223E7ERA6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF223E7ERA6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF223E7ERA6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF223E7ERA6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF223E7ERA6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF223E7ERA6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 RNA5SP183-201ENST00000362452 119 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 RN7SKP104-201ENST00000362605 328 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 Y_RNA.52-201ENST00000362760 96 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 RNU1-64P-201ENST00000365443 163 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 RNA5SP30-201ENST00000365552 115 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 RNU1-73P-201ENST00000383971 164 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 RNU6-1124P-201ENST00000384169 107 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 CBX3P9-201ENST00000402326 552 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 AC004866.1-201ENST00000411748 78 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 AL139281.1-201ENST00000422120 335 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 RPL37P4-201ENST00000448908 268 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 AC012308.1-201ENST00000451232 178 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 RN7SL97P-201ENST00000486780 299 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 RNU6-109P-201ENST00000516364 107 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 RNU6-184P-201ENST00000516514 107 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 AC027176.1-201ENST00000560204 514 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 AC009163.5-201ENST00000575421 637 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 MIR3923-201ENST00000579521 83 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 MIR4436B2-201ENST00000581415 91 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 AC090897.2-201ENST00000581715 130 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 MIR4436B1-201ENST00000583272 91 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 AC012616.1-201ENST00000600294 197 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 AL021707.8-201ENST00000609428 183 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 AC100827.5-201ENST00000615883 426 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 Y_RNA.818-201ENST00000618813 71 ntBASIC4.7□□□□□ -1.66
RNF223E7ERA6 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF223E7ERA6 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF223E7ERA6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms