Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC128713.1-201ENST00000471495 306 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 AC011005.2-201ENST00000487324 359 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 AC083904.1-201ENST00000487828 231 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 TRBVA-201ENST00000498804 316 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.17□□□□□ -1.9
NPIPB4C9JG80 Y_RNA.702-201ENST00000516843 96 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 AC069113.1-201ENST00000517763 267 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 BTF3P12-201ENST00000519620 469 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 AC087241.2-201ENST00000535801 324 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 AP000763.2-201ENST00000540641 163 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.17□□□□□ -1.9
NPIPB4C9JG80 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NPIPB4C9JG80 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPB4C9JG80 MIR4425-201ENST00000580572 84 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 AC012468.1-201ENST00000604888 430 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 MIR7851-201ENST00000610611 160 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPB4C9JG80 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPB4C9JG80 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
NPIPB4C9JG80 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.17□□□□□ -1.9
NPIPB4C9JG80 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NPIPB4C9JG80 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.17□□□□□ -1.9
NPIPB4C9JG80 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
NPIPB4C9JG80 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 RNU6-266P-201ENST00000364225 107 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 SNORD14B-201ENST00000364533 90 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 RNA5SP51-201ENST00000364750 119 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 RNU6-867P-201ENST00000364956 107 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 SNORA32.2-201ENST00000384049 122 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 RNU6-658P-201ENST00000384606 106 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 RNU2-3P-201ENST00000410144 191 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 RPL35AP12-201ENST00000425362 338 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 MTCO3P46-201ENST00000425787 232 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 TOMM20P4-201ENST00000427861 435 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AP000907.1-201ENST00000428428 510 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 NDUFA5P4-201ENST00000436704 385 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AC010099.1-201ENST00000455434 375 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 RPS4XP2-201ENST00000458402 793 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 HMGN1P11-201ENST00000508668 303 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AC046134.1-201ENST00000514454 666 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 NACAP3-201ENST00000552100 481 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AL391261.3-201ENST00000557194 520 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 TGIF1P1-201ENST00000558095 802 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AL355073.2-201ENST00000612106 557 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AC022306.2-201ENST00000617563 647 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AC009248.2-201ENST00000619826 254 ntBASIC3.16□□□□□ -1.9
NPIPB4C9JG80 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.16□□□□□ -1.9
NPIPB4C9JG80 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
NPIPB4C9JG80 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NPIPB4C9JG80 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 SNORD9-201ENST00000362566 104 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 RNU6-1303P-201ENST00000364841 107 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 Y_RNA.414-201ENST00000384011 101 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 MIR34A-201ENST00000385130 110 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 AL592148.1-201ENST00000413568 445 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 CYCSP33-201ENST00000414485 327 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 SKA2P1-201ENST00000425592 390 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 RNU7-66P-201ENST00000459469 62 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 RNU1-86P-201ENST00000516108 154 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 RNU1-107P-201ENST00000516617 154 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 SNORA70.19-201ENST00000516717 90 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 RN7SKP256-201ENST00000517201 314 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 AC107953.1-201ENST00000522216 297 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 IGHV3-76-201ENST00000522465 295 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 AC243972.3-201ENST00000539655 198 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 MIR5047-201ENST00000579212 100 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 UBE2V2P2-201ENST00000587677 504 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 RMST_8.1-201ENST00000610287 165 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.15□□□□□ -1.91
NPIPB4C9JG80 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
NPIPB4C9JG80 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.14□□□□□ -1.91
NPIPB4C9JG80 AC073073.2-201ENST00000609827 2578 ntBASIC3.14□□□□□ -1.91
NPIPB4C9JG80 AC233263.6-201ENST00000631132 1963 ntBASIC3.14□□□□□ -1.91
NPIPB4C9JG80 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.14□□□□□ -1.91
NPIPB4C9JG80 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPIPB4C9JG80 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
NPIPB4C9JG80 RNU6-845P-201ENST00000362578 103 ntBASIC3.14□□□□□ -1.91
NPIPB4C9JG80 Y_RNA.166-201ENST00000363730 102 ntBASIC3.14□□□□□ -1.91
NPIPB4C9JG80 RNU6-198P-201ENST00000384258 104 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms