Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 MTND5P9-201ENST00000503854 1755 ntBASIC0.83□□□□□ -2.28
TCRBV3S1A0A5B6 ZNF680P1-201ENST00000436625 1469 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 RNU5E-8P-201ENST00000363502 116 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 RNA5SP126-201ENST00000365092 109 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 MIR561-201ENST00000385216 97 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AL591034.2-201ENST00000402839 359 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 LUZP4P1-201ENST00000415420 344 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AL137159.1-201ENST00000452808 512 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 RPS20P20-201ENST00000460498 340 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AC005908.1-201ENST00000468701 347 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AC087343.1-201ENST00000477341 475 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 RNU6-528P-201ENST00000516926 100 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 SNORA48.11-201ENST00000517015 89 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 RNA5SP291-201ENST00000517222 105 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AC124293.1-201ENST00000530034 493 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AC008127.2-201ENST00000549925 1075 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 RPS3AP4-201ENST00000555161 764 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 ROCK1P1-201ENST00000573767 549 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 BNIP3P23-201ENST00000599655 511 ntBASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.82□□□□□ -2.28
TCRBV3S1A0A5B6 RNU6-582P-201ENST00000362989 107 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 RNA5SP465-201ENST00000391195 109 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 CCDC58P2-201ENST00000417131 366 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 RAC1P8-201ENST00000427086 527 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AC093422.3-201ENST00000428506 305 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 FCF1P6-201ENST00000456841 595 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 RNU6-775P-201ENST00000459318 96 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 CKS1BP2-201ENST00000497342 240 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AC112198.4-201ENST00000515450 351 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 RNU6-760P-201ENST00000516078 97 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AC135279.1-201ENST00000543493 504 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AC006199.1-201ENST00000548728 219 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 SNRPGP17-201ENST00000603780 214 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AC123912.5-201ENST00000605470 343 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AC024257.5-201ENST00000612739 531 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 AC009032.1-201ENST00000617574 431 ntBASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TCRBV3S1A0A5B6 Z75746.1-201ENST00000440243 2080 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 Y_RNA.111-201ENST00000363248 100 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 RNU1-23P-201ENST00000363361 144 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 RNU6-657P-201ENST00000383904 107 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 MIR518D-201ENST00000385014 87 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 RN7SKP61-201ENST00000410642 295 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC092634.2-201ENST00000428146 1010 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 SNRPEP9-201ENST00000436794 238 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AL161651.1-201ENST00000440882 223 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 RPS27P1-201ENST00000450552 247 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 RPL32P14-201ENST00000463196 378 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 OR9N1P-202ENST00000494289 481 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC048346.1-201ENST00000510247 144 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 SNORA25.11-201ENST00000515935 105 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 RNU6-548P-201ENST00000517083 115 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AP003034.1-201ENST00000534621 422 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 CYB5AP5-201ENST00000549779 389 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 NACAP3-201ENST00000552100 481 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC023824.3-201ENST00000569003 562 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC005668.1-201ENST00000571142 476 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 HSPE1P19-201ENST00000603327 295 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AL713866.2-201ENST00000603579 219 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC004853.1-201ENST00000604902 698 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AF129408.1-201ENST00000608767 431 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AL118556.2-201ENST00000614375 824 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC013476.2-201ENST00000614456 459 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AL109620.1-201ENST00000618738 1197 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 AC241585.2-209ENST00000638217 143 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.8□□□□□ -2.28
TCRBV3S1A0A5B6 Y_RNA.548-201ENST00000384656 105 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms