Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-223P-201ENST00000362830 107 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 RNU1-42P-201ENST00000364033 160 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 Y_RNA.245-201ENST00000364493 95 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 RNA5SP190-201ENST00000365222 118 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 MIR764-201ENST00000390811 85 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC068050.1-201ENST00000394891 380 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 TXNP7-201ENST00000406296 293 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 RN7SKP51-201ENST00000410781 304 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 BTF3P8-201ENST00000414577 526 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AL513185.2-201ENST00000425543 193 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 PTGES3P4-201ENST00000426243 356 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 DPRXP1-201ENST00000426312 460 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC092634.2-201ENST00000428146 1010 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 COX7BP2-201ENST00000437976 242 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AL360221.1-201ENST00000445989 335 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 RPL23AP6-201ENST00000446637 472 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 SNORD13-201ENST00000459299 104 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AP001324.2-201ENST00000461163 319 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC018868.1-201ENST00000491307 315 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 MTCO2P15-201ENST00000532655 656 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC015720.1-201ENST00000565251 277 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 MIR3683-201ENST00000580847 82 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC243960.4-201ENST00000600532 288 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AL355598.1-201ENST00000604169 202 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 TUG1_2.1-201ENST00000614234 87 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC093875.1-201ENST00000623688 504 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AP000648.3-201ENST00000623539 4507 ntBASIC1.17□□□□□ -2.22
TRAV3A0A0B4J244 AC107982.1-201ENST00000507171 1300 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 RNU4-13P-201ENST00000364019 141 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 U3.13-201ENST00000364804 214 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-609P-201ENST00000365459 107 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-354P-201ENST00000383862 107 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-610P-201ENST00000384264 107 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 MIR518A2-201ENST00000384966 87 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 MIR517C-201ENST00000385103 95 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 RPL22P22-201ENST00000395439 379 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AL356421.1-201ENST00000403255 413 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AL353621.1-201ENST00000418219 243 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 USP9YP26-201ENST00000421008 661 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 HMGB1P27-201ENST00000431429 603 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 VN1R108P-201ENST00000431580 830 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 SEPT7P5-201ENST00000434048 306 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 MTND6P13-201ENST00000443510 523 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 CYP2C59P-201ENST00000457790 269 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 RPL22P13-201ENST00000493291 347 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AC008628.1-201ENST00000508663 265 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-970P-201ENST00000516312 107 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 NDUFA5P6-201ENST00000542110 379 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AC243773.3-201ENST00000613270 256 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AC022202.1-201ENST00000613515 211 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AC003001.2-201ENST00000616294 831 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AC109454.4-201ENST00000623411 649 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 AC019226.1-201ENST00000625666 515 ntBASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV3A0A0B4J244 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 RNA5SP99-201ENST00000364020 114 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-60P-201ENST00000364792 103 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-207P-201ENST00000384137 107 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-19P-201ENST00000384718 107 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AL033519.2-201ENST00000403958 392 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AL139397.2-201ENST00000404529 772 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-955P-201ENST00000410497 104 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC127391.1-201ENST00000411737 98 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 OR9R1P-201ENST00000412200 877 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC097463.2-201ENST00000421074 142 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AL353729.1-201ENST00000425044 720 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 ISCA1P1-201ENST00000426679 387 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 MTND4P6-201ENST00000438297 472 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AL161788.1-201ENST00000441805 169 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC020550.1-201ENST00000447385 163 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AL353718.1-201ENST00000451028 517 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 CECR9-201ENST00000453421 199 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms