Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNA5SP213-201ENST00000391031 106 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-1197P-201ENST00000391183 107 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 PPIAP31-201ENST00000405422 495 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 SNORA77-201ENST00000408716 125 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RPS29P9-201ENST00000440360 171 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL37P4-201ENST00000448908 268 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 SSXP4-201ENST00000451349 245 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 AC010326.1-201ENST00000462726 602 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 AF186996.7-201ENST00000492781 209 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 AC072052.1-201ENST00000496556 306 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL7P47-201ENST00000497299 556 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-1282P-201ENST00000516735 96 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL23AP53-201ENST00000521854 457 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 MIR548AI-201ENST00000579940 88 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 MIR4423-201ENST00000580922 80 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 AC011447.4-201ENST00000587562 111 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 FTX_3.1-201ENST00000610451 147 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-942P-201ENST00000363002 107 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-626P-201ENST00000363354 107 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 Y_RNA.275-201ENST00000364726 110 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 Y_RNA.291-201ENST00000364886 113 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-898P-201ENST00000365627 104 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 MIR325-201ENST00000385260 98 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-493P-201ENST00000391321 108 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL19P1-201ENST00000411635 428 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 AC079355.1-201ENST00000421770 223 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 HMGN2P30-201ENST00000423237 256 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL21P66-201ENST00000426566 466 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 BX323845.1-201ENST00000432417 179 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 AL450023.3-201ENST00000440592 271 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL23AP81-201ENST00000455252 467 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RPS5P7-201ENST00000456664 608 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL23AP14-201ENST00000468281 468 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL30P5-201ENST00000494923 336 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 IGKV2-38-201ENST00000517443 247 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 RN7SL52P-201ENST00000584271 284 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 OR14L1P-202ENST00000641545 3009 ntBASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA11Q9Y5H2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDHGA11Q9Y5H2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDHGA11Q9Y5H2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
PCDHGA11Q9Y5H2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
PCDHGA11Q9Y5H2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDHGA11Q9Y5H2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AP000542.2-201ENST00000623199 6179 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AL079305.1-201ENST00000623159 3008 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 FTLP6-201ENST00000355274 422 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 RNA5SP361-201ENST00000362686 118 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.230-201ENST00000364348 109 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 Z98749.2-208ENST00000381646 500 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 SNORD116-20-201ENST00000384529 92 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 SNORA66-201ENST00000384792 133 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR518D-201ENST00000385014 87 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 SNORA46.1-201ENST00000391069 153 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms