Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 CYCSP39-201ENST00000565821 309 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 FKBP1AP1-201ENST00000594588 318 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 AL691477.1-201ENST00000624398 162 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU1-62P-201ENST00000362599 164 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 SNORD1C-201ENST00000363315 78 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 SNORA74A-201ENST00000364089 198 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-647P-201ENST00000364243 107 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-144P-201ENST00000383951 107 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 MIR544A-201ENST00000384855 91 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-554P-201ENST00000410466 106 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 Y_RNA.617-201ENST00000410920 90 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 AC012306.1-201ENST00000423267 114 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 AC079780.1-201ENST00000428259 207 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 CKS1BP5-201ENST00000434172 273 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 HSPE1P21-201ENST00000438283 308 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 RN7SL610P-201ENST00000463845 291 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-412P-201ENST00000516434 106 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 RNA5SP34-201ENST00000516887 130 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 LINC00933-203ENST00000559812 219 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 MIR378D2-201ENST00000580636 98 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 MIR4472-2-201ENST00000582069 67 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 AL359198.2-201ENST00000611836 194 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 AL450326.2-201ENST00000421913 1962 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 AC026523.2-201ENST00000625039 7739 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 BCORP1-203ENST00000513194 5093 ntBASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
PCDHGA4Q9Y5G9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 LINC01963-201ENST00000562038 3148 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 Y_RNA.341-201ENST00000365341 102 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 Y_RNA.456-201ENST00000384232 111 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-49P-201ENST00000384256 107 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-855P-201ENST00000410395 104 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 OR2AT2P-201ENST00000413438 905 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 RPS12P17-201ENST00000438591 377 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 AC112498.1-201ENST00000444401 332 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU7-141P-201ENST00000459304 62 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 KC877373.1-201ENST00000479066 408 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 AL356575.1-201ENST00000603008 283 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 FO393422.1-201ENST00000603908 708 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 AC015813.4-201ENST00000610469 179 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 AP001318.4-201ENST00000616637 121 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA4Q9Y5G9 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 SNORD115-30-201ENST00000364117 82 ntBASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 U3.10-201ENST00000364459 214 ntBASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 SNORA79-201ENST00000408376 140 ntBASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU4-34P-201ENST00000410431 124 ntBASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 AL389915.2-201ENST00000454576 441 ntBASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 RPL23AP14-201ENST00000468281 468 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms