Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 RNU1-61P-201ENST00000516107 151 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 RNU6-256P-201ENST00000516747 97 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AC069113.1-201ENST00000517763 267 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AC007991.1-201ENST00000522680 631 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AP005597.4-201ENST00000526762 229 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AP000889.1-201ENST00000530968 660 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AC107016.1-201ENST00000550463 337 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 ZNF192P1-203ENST00000565888 810 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 DUSP12P1-201ENST00000612874 516 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 SNORD39.4-201ENST00000620099 78 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AL133216.2-202ENST00000634512 349 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AC022336.2-201ENST00000568966 2538 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AL049641.1-201ENST00000441055 1948 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 Y_RNA.326-201ENST00000365176 113 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 RNU6-1227P-201ENST00000383981 107 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 RNU1-89P-201ENST00000384592 164 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 MIR578-201ENST00000384828 96 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 MIR183-201ENST00000384958 110 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 HMGN2P8-201ENST00000391458 268 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 SNORA3.3-201ENST00000408712 125 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AC092047.1-201ENST00000424997 240 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 HMGB3P11-201ENST00000440127 604 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AC104619.4-201ENST00000510773 249 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 TBCAP3-201ENST00000512475 312 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 RN7SKP209-201ENST00000516888 304 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AP003122.3-201ENST00000526316 255 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AC084851.1-201ENST00000529105 249 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 U6.105-201ENST00000637379 88 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AL133383.2-201ENST00000622958 2336 ntBASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHB1Q9Y5F3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
PCDHB1Q9Y5F3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 FAM35BP-202ENST00000497389 3337 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AC118273.1-201ENST00000525324 3006 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 SNORA63-201ENST00000363450 132 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 U1.1-201ENST00000384101 164 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.474-201ENST00000384341 102 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 PTMAP5-201ENST00000393073 333 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 SNORA11.2-201ENST00000408318 127 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 U3.42-201ENST00000408746 214 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 VN1R36P-201ENST00000414936 291 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL353621.1-201ENST00000418219 243 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL035423.1-201ENST00000420331 213 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL139396.1-201ENST00000421137 167 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AF228730.4-201ENST00000421457 183 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 MTCO2P12-201ENST00000427426 682 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL360271.2-201ENST00000447710 161 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 RPS23P3-201ENST00000470993 430 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 TRBV12-2-201ENST00000489763 344 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 UBE2CP3-201ENST00000502715 450 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AC074250.1-201ENST00000511117 192 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 RPL39P5-202ENST00000512505 151 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 SCARNA14-201ENST00000516903 136 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AC087854.1-201ENST00000519706 414 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 428 ms