Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL132838.2-201ENST00000492041 314 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AC016632.1-201ENST00000503994 196 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 MRPS21P7-201ENST00000566937 238 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 IPO5P1-202ENST00000600039 287 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AC018809.2-201ENST00000602436 3823 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AC025166.1-201ENST00000612411 163 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 MIR367-201ENST00000362299 68 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 RNU6-1285P-201ENST00000363480 105 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 Y_RNA.219-201ENST00000364232 113 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 RNA5SP510-201ENST00000364697 99 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 MIRLET7F2-201ENST00000385277 83 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 SNORA48.4-201ENST00000391089 134 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 RNU6-592P-201ENST00000411333 103 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 BMS1P17-202ENST00000416720 316 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 AL355433.1-201ENST00000422804 300 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 AC011276.1-201ENST00000469688 323 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 RNU6-970P-201ENST00000516312 107 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 AP004607.1-201ENST00000524456 203 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 HSPE1P4-201ENST00000550617 308 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 MIR378D2-201ENST00000580636 98 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 AC012616.1-201ENST00000600294 197 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 SMG1P7-201ENST00000565246 2704 ntBASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS9D1Q9Y2B5 AC104964.3-201ENST00000606115 2860 ntBASIC5.46□□□□□ -1.53
VPS9D1Q9Y2B5 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.46□□□□□ -1.53
VPS9D1Q9Y2B5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VPS9D1Q9Y2B5 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.46□□□□□ -1.53
VPS9D1Q9Y2B5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 RNA5SP284-201ENST00000384547 118 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 RNA5SP31-201ENST00000411144 127 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 GPS2P1-201ENST00000411761 986 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 RPS20P14-201ENST00000412545 360 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 SNRPGP7-201ENST00000469016 106 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 AC006445.2-201ENST00000510061 472 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 RNU6-1146P-201ENST00000516282 102 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 AC018630.3-201ENST00000542637 96 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 AC010547.6-201ENST00000571789 193 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 AL672167.1-205ENST00000641112 3080 ntBASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
VPS9D1Q9Y2B5 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms