Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NOD1Q9Y239 LINC01109-201ENST00000603837 3081 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NOD1Q9Y239 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NOD1Q9Y239 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NOD1Q9Y239 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NOD1Q9Y239 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NOD1Q9Y239 AL359693.1-201ENST00000614959 2407 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NOD1Q9Y239 RNU6-1266P-201ENST00000362794 105 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 U3.15-201ENST00000365398 212 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 RPL21P40-201ENST00000428586 483 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 TOMM22P6-201ENST00000465035 409 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 AC090602.1-201ENST00000469695 252 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 SNORA31.18-201ENST00000517043 134 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 AC010186.2-204ENST00000537668 439 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NOD1Q9Y239 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 AC105129.1-201ENST00000560250 297 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 AC060766.3-201ENST00000591442 263 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 U2.22-201ENST00000636441 106 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NOD1Q9Y239 AC104623.2-202ENST00000623477 4002 ntBASIC5.12□□□□□ -1.59
NOD1Q9Y239 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NOD1Q9Y239 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.12□□□□□ -1.59
NOD1Q9Y239 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NOD1Q9Y239 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NOD1Q9Y239 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NOD1Q9Y239 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NOD1Q9Y239 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 AC021146.4-201ENST00000309229 279 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 RNU6-78P-201ENST00000362897 107 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 Y_RNA.269-201ENST00000364685 89 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 SNORA70C-201ENST00000384538 135 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 BTF3L4P2-201ENST00000392798 346 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 COX5BP7-201ENST00000414780 274 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 AL590383.1-201ENST00000428602 75 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 snoU13.4-201ENST00000458916 104 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 MED28P2-201ENST00000475771 317 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 RN7SL810P-201ENST00000493031 276 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 AC073073.1-201ENST00000493920 463 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 MIR2116-201ENST00000517221 80 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 AC114781.5-201ENST00000615297 108 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 AC240442.1-201ENST00000616055 283 ntBASIC5.11□□□□□ -1.59
NOD1Q9Y239 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NOD1Q9Y239 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NOD1Q9Y239 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NOD1Q9Y239 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NOD1Q9Y239 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
NOD1Q9Y239 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.1□□□□□ -1.59
NOD1Q9Y239 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NOD1Q9Y239 RNU6-1181P-201ENST00000384191 106 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 Y_RNA.541-201ENST00000384640 113 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 AL079342.1-201ENST00000401460 267 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 RNU2-20P-201ENST00000410425 191 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 Y_RNA.602-201ENST00000410535 92 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 AC079809.1-201ENST00000415468 276 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 AC098614.2-201ENST00000426040 255 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 RPS29P17-201ENST00000430795 166 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 AC104332.1-201ENST00000440471 797 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 NUTF2P3-201ENST00000448540 384 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 AL138752.1-201ENST00000452964 351 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.1□□□□□ -1.59
NOD1Q9Y239 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.1□□□□□ -1.59
NOD1Q9Y239 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.1□□□□□ -1.59
NOD1Q9Y239 SNORA70.16-201ENST00000516390 95 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 SCARNA24.2-201ENST00000516968 130 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 AC090617.3-201ENST00000573670 475 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 AC053481.4-201ENST00000583164 216 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 MIR3138-201ENST00000585238 82 ntBASIC5.1□□□□□ -1.59
NOD1Q9Y239 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.1□□□□□ -1.59
NOD1Q9Y239 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.1□□□□□ -1.59
NOD1Q9Y239 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms