Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AC112206.3-201ENST00000514578 389 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 RNU1-103P-201ENST00000516502 125 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 SYF2P1-201ENST00000550658 413 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AL732372.2-225ENST00000642124 456 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 AL365361.1-201ENST00000566942 3481 ntBASIC3.49□□□□□ -1.85
VPS4AQ9UN37 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VPS4AQ9UN37 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AL672296.1-201ENST00000427780 2158 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 RNA5SP295-201ENST00000362655 121 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 RNU6-371P-201ENST00000364283 108 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 SNORD81.2-201ENST00000365153 76 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 Y_RNA.378-201ENST00000365652 113 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 RNU6-510P-201ENST00000391239 108 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 RN7SKP32-201ENST00000410167 303 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 RNU4-26P-201ENST00000410270 107 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AC080125.1-201ENST00000414888 684 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AL160275.3-201ENST00000423876 471 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AL356867.1-201ENST00000429623 299 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 FTH1P25-201ENST00000447665 469 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 FABP5P13-201ENST00000452144 328 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AC007547.1-201ENST00000462177 490 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 RNU6-914P-201ENST00000516749 109 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 RN7SKP289-201ENST00000517244 295 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AC107953.1-201ENST00000522216 297 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 BNIP3P25-201ENST00000596023 559 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 MIR15A-201ENST00000607334 83 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AC092807.2-201ENST00000609367 243 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AC009233.1-201ENST00000616477 371 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AC009248.2-201ENST00000619826 254 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 MTND1P37-201ENST00000636562 264 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AP000553.6-201ENST00000641242 118 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 AC007656.2-201ENST00000624902 4547 ntBASIC3.48□□□□□ -1.85
VPS4AQ9UN37 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS4AQ9UN37 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC008568.2-201ENST00000623862 2313 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 RNU6-288P-201ENST00000363690 104 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 RNU6-116P-201ENST00000384042 109 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 SNORA16.2-201ENST00000390991 127 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC017079.2-201ENST00000416102 485 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC009161.1-201ENST00000417306 376 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 RPL35AP12-201ENST00000425362 338 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 HMGB1P27-201ENST00000431429 603 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC073063.1-201ENST00000434352 607 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 IFNA20P-201ENST00000436840 528 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 RPL21P23-201ENST00000446654 460 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC008264.1-201ENST00000447612 367 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AL590639.1-201ENST00000456484 337 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 SNORD105B-201ENST00000458770 79 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC009901.1-201ENST00000506703 541 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 RNU6-1256P-201ENST00000516539 103 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 RNA5SP468-201ENST00000516782 93 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 SCARNA14-201ENST00000516903 136 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 RNA5SP471-201ENST00000516971 106 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC090136.1-201ENST00000520009 240 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 RPL7P20-201ENST00000520308 745 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC087241.2-201ENST00000535801 324 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 MIR4738-201ENST00000579134 87 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC098826.3-201ENST00000603823 466 ntBASIC3.47□□□□□ -1.85
VPS4AQ9UN37 AC013553.2-201ENST00000604244 589 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms