Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC110741.2-201ENST00000605278 268 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC004805.2-201ENST00000605382 482 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC098657.3-201ENST00000620434 263 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AL669831.3-213ENST00000636676 183 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AL049641.1-201ENST00000441055 1948 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC090740.1-201ENST00000623193 2262 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DDX41Q9UJV9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
DDX41Q9UJV9 Y_RNA.202-201ENST00000364083 110 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 Y_RNA.445-201ENST00000384168 102 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 MIR34A-201ENST00000385130 110 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 SNORA75.4-201ENST00000391278 119 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 RPL5P18-201ENST00000406671 891 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 MIR1183-201ENST00000408856 89 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
DDX41Q9UJV9 Y_RNA.623-201ENST00000411128 95 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 AL627311.1-201ENST00000431514 115 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 AL512844.2-201ENST00000433990 593 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 SNRPEP9-201ENST00000436794 238 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 NDUFB4P6-201ENST00000436819 366 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 HMGB1P12-201ENST00000438594 598 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.63□□□□□ -1.67
DDX41Q9UJV9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.63□□□□□ -1.67
DDX41Q9UJV9 MRPS31P2-201ENST00000451581 518 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.63□□□□□ -1.67
DDX41Q9UJV9 RPS4XP13-201ENST00000483219 789 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 AC090096.1-201ENST00000489168 390 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 RNU1-86P-201ENST00000516108 154 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 RNU1-107P-201ENST00000516617 154 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 RNA5SP309-201ENST00000516670 106 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 RNU6-1282P-201ENST00000516735 96 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.63□□□□□ -1.67
DDX41Q9UJV9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
DDX41Q9UJV9 AC020661.2-201ENST00000560114 134 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
DDX41Q9UJV9 AL606490.9-201ENST00000603331 271 ntBASIC4.63□□□□□ -1.67
DDX41Q9UJV9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
DDX41Q9UJV9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 KPNA2P1-201ENST00000458289 1591 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 Y_RNA.197-201ENST00000364004 102 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 MIR325-201ENST00000385260 98 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 RNU6-328P-201ENST00000390887 106 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AL445529.1-201ENST00000398713 389 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 RNU6-1050P-201ENST00000410388 107 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 RNU4-6P-201ENST00000410804 122 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 CYCSP19-201ENST00000411715 316 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 TMEM167AP1-201ENST00000423409 219 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AC092047.1-201ENST00000424997 240 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AC007560.1-201ENST00000426912 237 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 HIGD1AP11-201ENST00000438361 280 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 ANP32BP2-201ENST00000454525 545 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AL583843.1-201ENST00000456070 346 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 SNORA67.7-201ENST00000516664 135 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AC023632.4-201ENST00000517783 191 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 MIR3171-201ENST00000584270 74 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AC022432.1-201ENST00000595739 310 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AC136601.2-201ENST00000604356 474 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AP000787.2-201ENST00000604432 568 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 ELOCP5-201ENST00000604924 333 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AC019193.3-201ENST00000609144 554 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AL161423.1-201ENST00000613700 262 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AC048347.1-201ENST00000624621 427 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 AC118273.1-201ENST00000525324 3006 ntBASIC4.62□□□□□ -1.67
DDX41Q9UJV9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
DDX41Q9UJV9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 LINC02471-203ENST00000641941 4752 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 AC022336.2-201ENST00000568966 2538 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 Y_RNA.422-201ENST00000384054 114 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 RNU6-140P-201ENST00000384566 108 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 Z99755.1-201ENST00000414048 380 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 MYL8P-204ENST00000431574 518 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX41Q9UJV9 AC092573.2-201ENST00000434546 243 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 RPS23P3-201ENST00000470993 430 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 AC096576.1-201ENST00000489014 359 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 AC104576.1-201ENST00000524225 88 ntBASIC4.61□□□□□ -1.67
DDX41Q9UJV9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms