Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CPNE7Q9UBL6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CPNE7Q9UBL6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CPNE7Q9UBL6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 SNORD113-7-201ENST00000363762 77 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 RNU6-1179P-201ENST00000384667 107 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 ARF4P2-201ENST00000430209 526 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 ATP5HP2-201ENST00000433885 485 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 IFNA20P-201ENST00000436840 528 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 SSXP4-201ENST00000451349 245 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC106707.2-201ENST00000484182 374 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC083904.1-201ENST00000487828 231 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC069499.1-201ENST00000489433 509 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 TRBV12-2-201ENST00000489763 344 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC091951.2-201ENST00000500762 203 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 RNU6-875P-201ENST00000516488 106 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 BTF3P12-201ENST00000519620 469 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC090136.1-201ENST00000520009 240 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC025755.1-201ENST00000521306 278 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 HSPE1P7-201ENST00000604681 321 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC007938.3-201ENST00000604965 623 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 LARP7P1-201ENST00000605576 316 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC008962.1-201ENST00000605729 304 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 RMST_4.1-201ENST00000616886 107 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC068831.7-201ENST00000616954 363 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AP000553.6-201ENST00000641242 118 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 AC119674.1-207ENST00000641355 633 ntBASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CPNE7Q9UBL6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.59□□□□□ -1.84
CPNE7Q9UBL6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.59□□□□□ -1.84
CPNE7Q9UBL6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 RNA5SP119-201ENST00000362715 117 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 Y_RNA.414-201ENST00000384011 101 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 SNORA32.2-201ENST00000384049 122 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 RNU6-1009P-201ENST00000390996 107 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 SNORA40C-201ENST00000391285 128 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 RPS4XP7-201ENST00000406274 780 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 RNU6-1148P-201ENST00000410992 104 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 MTND3P8-201ENST00000412909 339 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 YME1L1P1-201ENST00000429435 297 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 HMGN2P31-201ENST00000432430 273 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 MTATP6P7-201ENST00000453315 681 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 RPL23AP62-201ENST00000463396 453 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 MTND3P25-201ENST00000509243 135 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 RNU6-703P-201ENST00000516946 107 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 AC107953.1-201ENST00000522216 297 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 AC243972.3-201ENST00000539655 198 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 AL645944.1-201ENST00000603857 493 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 AL022345.1-201ENST00000607292 135 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 U2.21-201ENST00000637295 81 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 ZNF826P-207ENST00000622273 1910 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 MFSD8-236ENST00000641509 4050 ntBASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CPNE7Q9UBL6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 RNU6-1013P-201ENST00000384180 107 ntBASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 MIR7-3-201ENST00000384898 110 ntBASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 RPS29P4-201ENST00000414733 161 ntBASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 AC098614.2-201ENST00000426040 255 ntBASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 RPL12P25-201ENST00000455592 494 ntBASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 SNORD105B-201ENST00000458770 79 ntBASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 RNU6-329P-201ENST00000459618 107 ntBASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 AC139453.3-201ENST00000493276 369 ntBASIC3.57□□□□□ -1.84
CPNE7Q9UBL6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms