Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AP006587.4-201ENST00000526053 529 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AC013828.2-201ENST00000532487 235 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 CYCSP26-201ENST00000534107 320 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AL121821.2-201ENST00000556081 394 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 ROCK1P1-201ENST00000573767 549 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 MTCO2P2-201ENST00000591258 225 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AC073544.2-201ENST00000601155 540 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AC009974.1-201ENST00000608881 455 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 PISRT1-201ENST00000626175 531 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AL359854.1-201ENST00000614203 1594 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AC069528.2-201ENST00000624849 1991 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AC106754.1-201ENST00000562632 1513 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 AC104454.1-201ENST00000421341 1401 ntBASIC2.17□□□□□ -2.06
KLHL28Q9NXS3 RNU6-188P-201ENST00000364207 107 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 RNU1-91P-201ENST00000364746 163 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 RNU6-14P-201ENST00000384630 106 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 RNU6-19P-201ENST00000384718 107 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 U3.40-201ENST00000408706 208 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AC003685.2-201ENST00000422795 395 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 OR6C5P-201ENST00000452388 923 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AL133241.1-201ENST00000556832 487 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AL049838.1-201ENST00000563647 981 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AC105245.1-201ENST00000581934 244 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 NRBF2P1-201ENST00000587407 859 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AC245884.10-201ENST00000597355 337 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AC091965.4-201ENST00000607691 587 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 OR4G3P-201ENST00000633500 913 ntBASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KLHL28Q9NXS3 AL109809.4-201ENST00000603520 2185 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 RNU6-486P-201ENST00000363116 107 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 RNA5SP88-201ENST00000365560 109 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 SNORA80E-201ENST00000384744 137 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 MIR147B-201ENST00000390185 80 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 USP9YP6-201ENST00000413550 854 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC106883.1-201ENST00000418805 562 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 RPS3AP44-201ENST00000425466 790 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 PTGES3P4-201ENST00000426243 356 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 Z98742.2-201ENST00000431564 187 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 FTH1P25-201ENST00000447665 469 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC068781.1-201ENST00000488231 618 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 YWHAEP4-201ENST00000505390 198 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC234781.5-201ENST00000508429 271 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 RPS3AP4-201ENST00000555161 764 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC025165.5-201ENST00000602802 578 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC016597.2-201ENST00000613256 341 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC009090.3-201ENST00000616553 565 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC024581.2-201ENST00000619986 252 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AL078595.3-201ENST00000623815 1166 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 HSPA8P4-201ENST00000511877 1920 ntBASIC2.15□□□□□ -2.07
KLHL28Q9NXS3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms