Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 HSPE1P12-201ENST00000412576 301 ntBASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 AC064862.5-201ENST00000440618 334 ntBASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 RNU6-762P-201ENST00000517107 102 ntBASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 AL022345.2-201ENST00000606307 135 ntBASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 AL021707.8-201ENST00000609428 183 ntBASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 RNA5SP439-201ENST00000617595 124 ntBASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 AC068213.1-201ENST00000625124 226 ntBASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 AC004656.1-201ENST00000568479 4951 ntBASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
FOXD4L1Q9NU39 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 AC020656.2-201ENST00000613291 5309 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 AL596211.1-201ENST00000569873 2277 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 RNU6-508P-201ENST00000363231 103 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 RNU6-529P-201ENST00000363383 104 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 RNA5SP485-201ENST00000365053 119 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 AL133475.1-201ENST00000404414 305 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 AL096829.1-201ENST00000413677 457 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 EDDM3CP-201ENST00000415977 425 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 RPS3P2-201ENST00000421346 701 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 AC094019.1-201ENST00000434678 472 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 SDC4P-201ENST00000453285 601 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 AC105137.1-201ENST00000484355 562 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 RN7SL284P-201ENST00000498823 275 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 RNU6-928P-201ENST00000516876 104 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 RNU1-104P-201ENST00000517280 175 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 RPS15AP11-201ENST00000594193 385 ntBASIC7.1□□□□□ -1.27
FOXD4L1Q9NU39 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 RNU6-600P-201ENST00000362524 99 ntBASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 RN7SKP17-201ENST00000411242 351 ntBASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 HMGN2P20-201ENST00000437531 273 ntBASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 HMGN2P32-201ENST00000444648 269 ntBASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 snoU13.14-201ENST00000459372 104 ntBASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 SNORA18.4-201ENST00000516440 124 ntBASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 RNU6-638P-201ENST00000516582 104 ntBASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 HSPE1P18-201ENST00000517602 280 ntBASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 RPSAP75-201ENST00000605848 301 ntBASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC7.09□□□□□ -1.27
FOXD4L1Q9NU39 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.09□□□□□ -1.28
FOXD4L1Q9NU39 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 RPL23P2-201ENST00000320371 421 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 Y_RNA.40-201ENST00000362645 93 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 RNU6-271P-201ENST00000363858 105 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 MIR3065-201ENST00000390137 79 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 MIR1302-5-201ENST00000408164 150 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 AC245096.1-201ENST00000413104 546 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 AL445584.1-201ENST00000431451 330 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 RPS27P18-201ENST00000431701 247 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 AL121890.1-201ENST00000435457 205 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 MTATP6P21-201ENST00000440681 189 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 HMGN2P21-201ENST00000447764 270 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 AL441985.1-201ENST00000457727 251 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 AC073308.1-201ENST00000623696 305 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 AL121839.2-201ENST00000565058 6943 ntBASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
FOXD4L1Q9NU39 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC7.07□□□□□ -1.28
FOXD4L1Q9NU39 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXD4L1Q9NU39 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXD4L1Q9NU39 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms