Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL139421.1-201ENST00000423010 169 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.47□□□□□ -2.17
CISHQ9NSE2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.47□□□□□ -2.17
CISHQ9NSE2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.47□□□□□ -2.17
CISHQ9NSE2 CKS1BP2-201ENST00000497342 240 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 RNA5SP112-201ENST00000515937 99 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
CISHQ9NSE2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.47□□□□□ -2.17
CISHQ9NSE2 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CISHQ9NSE2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.47□□□□□ -2.17
CISHQ9NSE2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.47□□□□□ -2.17
CISHQ9NSE2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CISHQ9NSE2 AL078605.1-201ENST00000603529 500 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 SEPT7P9-203ENST00000604116 343 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.47□□□□□ -2.17
CISHQ9NSE2 AC005332.6-201ENST00000613178 446 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 AL773524.1-201ENST00000614065 229 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.47□□□□□ -2.17
CISHQ9NSE2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CISHQ9NSE2 AC120349.2-201ENST00000625002 298 ntBASIC1.47□□□□□ -2.17
CISHQ9NSE2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.47□□□□□ -2.17
CISHQ9NSE2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.46□□□□□ -2.17
CISHQ9NSE2 AL390862.1-201ENST00000635467 1469 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 RNU6-778P-201ENST00000363269 103 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 RNU6-609P-201ENST00000365459 107 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 NDUFS5P1-201ENST00000405668 289 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CISHQ9NSE2 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 VN1R108P-201ENST00000431580 830 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 FABP5P14-201ENST00000437273 393 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CISHQ9NSE2 RPL23AP6-201ENST00000446637 472 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 AL353718.1-201ENST00000451028 517 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 AC013267.1-201ENST00000458227 267 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 RN7SKP210-201ENST00000459176 261 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 RNU7-95P-201ENST00000459222 64 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 AC092902.1-201ENST00000486999 259 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 RNU1-92P-201ENST00000517017 135 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 SNORA31.23-201ENST00000517219 133 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 AC026616.1-201ENST00000523157 525 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 AP004607.1-201ENST00000524456 203 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 DUXAP1-201ENST00000556632 463 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 AC023813.2-201ENST00000564321 469 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.46□□□□□ -2.18
CISHQ9NSE2 AP000942.3-201ENST00000603702 160 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 AC009233.1-201ENST00000616477 371 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 AL357080.1-201ENST00000617394 239 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 AC009268.2-201ENST00000621925 457 ntBASIC1.46□□□□□ -2.18
CISHQ9NSE2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CISHQ9NSE2 AC107982.1-201ENST00000507171 1300 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 U3.13-201ENST00000364804 214 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CISHQ9NSE2 RNU1-39P-201ENST00000383897 165 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 Y_RNA.548-201ENST00000384656 105 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 RNU2-63P-201ENST00000410792 194 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AL161449.1-201ENST00000414531 1199 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC244636.1-201ENST00000421152 228 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 SKA2P1-201ENST00000425592 390 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 SEPT7P5-201ENST00000434048 306 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 RSL24D1P8-201ENST00000434442 492 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 MTND2P20-201ENST00000440805 661 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CISHQ9NSE2 ARPC3P5-201ENST00000448802 534 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC087884.1-201ENST00000469738 328 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 MTCYBP18-201ENST00000501056 747 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.45□□□□□ -2.18
CISHQ9NSE2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CISHQ9NSE2 RNA5SP290-201ENST00000517133 127 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.45□□□□□ -2.18
CISHQ9NSE2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC107953.1-201ENST00000522216 297 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.45□□□□□ -2.18
CISHQ9NSE2 RPS3AP4-201ENST00000555161 764 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC233702.2-202ENST00000562547 291 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC079148.1-201ENST00000565944 819 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 UBE2L4-201ENST00000587688 464 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC012467.1-201ENST00000607740 256 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC243773.3-201ENST00000613270 256 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC022202.1-201ENST00000613515 211 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC020658.4-201ENST00000613987 684 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC010133.1-201ENST00000615809 842 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC109454.4-201ENST00000623411 649 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 ADAM3A-203ENST00000461344 2157 ntBASIC1.45□□□□□ -2.18
CISHQ9NSE2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms