Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 AC008088.1-201ENST00000580993 280 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 MIR4765-201ENST00000585007 77 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 BNIP3P22-201ENST00000593399 556 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 AC097504.2-201ENST00000608088 454 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 AC243994.1-201ENST00000618627 109 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 MTND4P8-201ENST00000514997 1362 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 AC018630.2-201ENST00000534866 2403 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 DEFB108F-201ENST00000344638 222 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 RNU6-486P-201ENST00000363116 107 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 PRELID3BP1-201ENST00000457142 540 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 RPS27AP10-201ENST00000496103 208 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 AC138853.1-201ENST00000503549 823 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 RNA5SP121-201ENST00000516537 101 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 RN7SKP219-201ENST00000516825 296 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 DEFB108D-201ENST00000527787 222 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 AP000916.1-201ENST00000533869 835 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 VN1R82P-201ENST00000601481 356 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 AL022345.2-201ENST00000606307 135 ntBASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.32□□□□□ -2.36
SMCO4Q9NRQ5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 AC068700.1-201ENST00000565862 3754 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 RNU6-1226P-201ENST00000384317 107 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 AC114737.2-201ENST00000421583 173 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 AL160275.3-201ENST00000423876 471 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 AL035410.1-201ENST00000427409 427 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 AL160175.1-201ENST00000428124 247 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 AC027119.1-201ENST00000440877 241 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 snoU13.26-201ENST00000459452 105 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 CKS1BP2-201ENST00000497342 240 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 AC104057.1-201ENST00000515547 497 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 RNU4-54P-201ENST00000516428 129 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 NRON-201ENST00000517270 370 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 AC007151.1-201ENST00000572774 483 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 AC012360.2-201ENST00000609349 391 ntBASIC0.31□□□□□ -2.36
SMCO4Q9NRQ5 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 MIR302D-201ENST00000362275 68 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 RNU6-17P-201ENST00000384245 107 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 RNU6-18P-201ENST00000384527 107 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 RNA5SP213-201ENST00000391031 106 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 AL049734.2-201ENST00000441066 616 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 HSPE1P13-201ENST00000451143 297 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 RN7SKP265-201ENST00000516448 223 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 SNORA31.22-201ENST00000517204 135 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 TRAV11-201ENST00000539512 339 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 AC125611.1-201ENST00000549563 229 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 AC233266.2-201ENST00000567067 528 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 FAM60CP-201ENST00000591086 664 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 BX284668.6-201ENST00000606899 438 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 MIR5739-201ENST00000619803 80 ntBASIC0.3□□□□□ -2.36
SMCO4Q9NRQ5 AC010889.1-201ENST00000566193 2666 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 MIR378A-201ENST00000362177 66 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 RNU6-251P-201ENST00000363235 104 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 SNORD1A-201ENST00000364968 72 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 RNU6-53P-201ENST00000365367 106 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 MIR222-201ENST00000384992 110 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 MIR29C-201ENST00000385231 88 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 MIR1261-201ENST00000408659 82 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 PNRC2P1-201ENST00000423940 420 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 KATNBL1P3-201ENST00000443475 909 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 CYP2C59P-201ENST00000457790 269 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 CYP3A52P-201ENST00000563326 91 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 AC008751.2-201ENST00000597885 980 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 SNRPGP17-201ENST00000603780 214 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 AL137246.1-201ENST00000607072 977 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 AP000238.1-201ENST00000608759 426 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.29□□□□□ -2.36
SMCO4Q9NRQ5 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.28□□□□□ -2.36
SMCO4Q9NRQ5 AC139712.2-201ENST00000424302 339 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms