Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC244035.1-201ENST00000430042 390 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 Z98742.2-201ENST00000431564 187 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AL161651.1-201ENST00000440882 223 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC016691.1-201ENST00000441321 413 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC096638.1-201ENST00000444678 216 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 TPT1P14-201ENST00000448018 505 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 HMGN2P10-201ENST00000448085 265 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 RPL23AP35-201ENST00000451906 501 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 USP9YP10-201ENST00000454868 628 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 RPL23AP49-201ENST00000492925 468 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC034222.1-201ENST00000494052 532 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 MIR4769-201ENST00000584126 77 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 VN1R82P-201ENST00000601481 356 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AL645944.1-201ENST00000603857 493 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC013244.3-201ENST00000605614 388 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC004908.2-201ENST00000609090 574 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 AC009159.1-201ENST00000618386 642 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 PCMTD1P7-201ENST00000634506 357 ntBASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TM9SF3Q9HD45 MTND5P6-201ENST00000422338 1798 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 RPL21P132-201ENST00000331267 462 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 RNU6-19P-201ENST00000384718 107 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 RNU6-253P-201ENST00000384730 105 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 RNU4-26P-201ENST00000410270 107 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC083875.1-201ENST00000419509 405 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AL353729.1-201ENST00000425044 720 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC010153.1-201ENST00000432862 727 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 ELOCP30-201ENST00000447108 299 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 KLF3P2-201ENST00000465138 268 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC104685.1-201ENST00000502445 371 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 RNU5A-4P-201ENST00000516588 111 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC105185.1-201ENST00000518705 535 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC013828.2-201ENST00000532487 235 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC023538.1-201ENST00000534576 736 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC006199.1-201ENST00000548728 219 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC078899.2-201ENST00000595282 212 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AC005261.5-201ENST00000596280 355 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 BNIP3P23-201ENST00000599655 511 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 BNIP3P10-201ENST00000605360 577 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 AP000676.3-201ENST00000623299 569 ntBASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.33□□□□□ -2.04
TM9SF3Q9HD45 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AP006437.1-201ENST00000641440 3685 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 RNU6-1200P-201ENST00000384162 107 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 SNORA41-201ENST00000384675 132 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 MIR1289-2-201ENST00000408360 111 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 MTCO1P17-201ENST00000411522 491 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 RPS24P7-201ENST00000416921 246 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 MTND1P20-201ENST00000430341 950 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AC098826.1-201ENST00000433943 471 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 PSPHP1-201ENST00000450062 261 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AC010631.1-201ENST00000474150 156 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 RNU7-193P-201ENST00000516723 65 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AC118273.2-201ENST00000532092 465 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AP000889.2-201ENST00000532684 490 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 MIR544B-201ENST00000582372 78 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 MTCYBP22-201ENST00000603788 447 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 AC068276.1-201ENST00000605793 379 ntBASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TM9SF3Q9HD45 U4atac.1-201ENST00000618345 95 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms