Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 RNU6-227P-201ENST00000362865 103 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 Y_RNA.116-201ENST00000363292 103 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 Y_RNA.123-201ENST00000363338 102 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 SNORA70C-201ENST00000384538 135 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 SNORA12.1-201ENST00000390873 148 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 RPL11P3-201ENST00000395256 523 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 AL513331.1-201ENST00000411908 397 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 AC087588.1-201ENST00000462203 316 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 AC107027.2-201ENST00000512197 115 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 APOOP4-201ENST00000513530 597 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 MTND5P34-201ENST00000568888 325 ntBASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CNTNAP3Q9BZ76 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 AP001029.2-203ENST00000589795 4910 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 AC015813.6-201ENST00000624409 5808 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 FTLP6-201ENST00000355274 422 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 SNORA71.3-201ENST00000362582 128 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 RNA5SP361-201ENST00000362686 118 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 RNU4-9P-201ENST00000364951 139 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 MIR153-1-201ENST00000384914 90 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 MIR129-1-201ENST00000384972 72 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 RN7SKP202-201ENST00000410439 330 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 RPS12P10-201ENST00000427031 377 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 RPS5P7-201ENST00000456664 608 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 Y_RNA.797-201ENST00000515977 94 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 RNU6-191P-201ENST00000516295 94 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 RNU6-1315P-201ENST00000517187 99 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 AC090049.2-201ENST00000550377 109 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 AP001340.1-201ENST00000624405 217 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 MAPK10-328ENST00000641553 4009 ntBASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNTNAP3Q9BZ76 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RNU6-199P-201ENST00000362954 107 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RNU6-961P-201ENST00000363893 105 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RNU6-384P-201ENST00000364900 104 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RNU6-395P-201ENST00000365662 106 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 Y_RNA.388-201ENST00000383919 113 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RNU6-213P-201ENST00000384051 104 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 SNORA36C-201ENST00000384289 132 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RNU6-843P-201ENST00000384454 104 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RNU6-1275P-201ENST00000391087 107 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RNU1-139P-201ENST00000391307 165 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 CRIP1P1-201ENST00000427567 185 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 KNOP1P3-201ENST00000446933 426 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 AC011276.1-201ENST00000469688 323 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RPL23AP45-201ENST00000476406 468 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RPL21P13-201ENST00000488305 481 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RN7SKP49-201ENST00000516675 260 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 RNU1-45P-201ENST00000517191 141 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 AC138965.3-201ENST00000623875 498 ntBASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.91□□□□□ -1.62
CNTNAP3Q9BZ76 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms