Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.14□□□□□ -2.23
SCAPERQ9BY12 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.14□□□□□ -2.23
SCAPERQ9BY12 RNU6-498P-201ENST00000459468 107 ntBASIC1.14□□□□□ -2.23
SCAPERQ9BY12 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.14□□□□□ -2.23
SCAPERQ9BY12 RNU5F-8P-201ENST00000515941 111 ntBASIC1.14□□□□□ -2.23
SCAPERQ9BY12 AC104997.1-201ENST00000519761 717 ntBASIC1.14□□□□□ -2.23
SCAPERQ9BY12 AC025588.3-201ENST00000604182 274 ntBASIC1.14□□□□□ -2.23
SCAPERQ9BY12 AC079791.1-201ENST00000605356 973 ntBASIC1.14□□□□□ -2.23
SCAPERQ9BY12 AC135803.1-201ENST00000608748 565 ntBASIC1.14□□□□□ -2.23
SCAPERQ9BY12 AP000254.1-201ENST00000609934 520 ntBASIC1.14□□□□□ -2.23
SCAPERQ9BY12 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.14□□□□□ -2.23
SCAPERQ9BY12 AC073308.1-201ENST00000623696 305 ntBASIC1.14□□□□□ -2.23
SCAPERQ9BY12 AP003400.5-201ENST00000624827 617 ntBASIC1.14□□□□□ -2.23
SCAPERQ9BY12 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SCAPERQ9BY12 RNU1-72P-201ENST00000362976 153 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.13□□□□□ -2.23
SCAPERQ9BY12 MIR1303-201ENST00000408625 86 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.13□□□□□ -2.23
SCAPERQ9BY12 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AL691517.1-201ENST00000440833 1235 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 RPL31P60-201ENST00000478450 367 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 RPS27P23-201ENST00000487608 251 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AC104806.1-201ENST00000508720 308 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AP003072.2-201ENST00000527756 676 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AC004812.1-201ENST00000540773 146 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AC023158.1-201ENST00000561632 1025 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AC005786.1-201ENST00000588553 154 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AC012669.1-201ENST00000603209 283 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AC093838.1-201ENST00000613014 469 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AL590410.1-201ENST00000617925 333 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AP002791.1-201ENST00000623291 381 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.13□□□□□ -2.23
SCAPERQ9BY12 MIR924-201ENST00000638017 53 ntBASIC1.13□□□□□ -2.23
SCAPERQ9BY12 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AL589743.1-201ENST00000551932 2712 ntBASIC1.12□□□□□ -2.23
SCAPERQ9BY12 RNA5SP125-201ENST00000364843 120 ntBASIC1.12□□□□□ -2.23
SCAPERQ9BY12 RN7SKP61-201ENST00000410642 295 ntBASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AC105313.1-201ENST00000509121 353 ntBASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AC008834.1-201ENST00000511612 175 ntBASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AC067942.3-201ENST00000512025 362 ntBASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AC112198.4-201ENST00000515450 351 ntBASIC1.12□□□□□ -2.23
SCAPERQ9BY12 RNU6-351P-201ENST00000516097 100 ntBASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AC092451.2-201ENST00000538746 658 ntBASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AL109933.3-201ENST00000619095 188 ntBASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.12□□□□□ -2.23
SCAPERQ9BY12 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.12□□□□□ -2.23
SCAPERQ9BY12 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.11□□□□□ -2.23
SCAPERQ9BY12 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.11□□□□□ -2.23
SCAPERQ9BY12 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.11□□□□□ -2.23
SCAPERQ9BY12 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SCAPERQ9BY12 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.11□□□□□ -2.23
SCAPERQ9BY12 AC022447.1-201ENST00000515358 464 ntBASIC1.11□□□□□ -2.23
SCAPERQ9BY12 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SCAPERQ9BY12 AC073968.1-201ENST00000618594 637 ntBASIC1.11□□□□□ -2.23
SCAPERQ9BY12 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SCAPERQ9BY12 MIR330-201ENST00000362196 94 ntBASIC1.1□□□□□ -2.23
SCAPERQ9BY12 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SCAPERQ9BY12 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.1□□□□□ -2.23
SCAPERQ9BY12 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.1□□□□□ -2.23
SCAPERQ9BY12 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.1□□□□□ -2.23
SCAPERQ9BY12 C1DP3-201ENST00000455013 423 ntBASIC1.1□□□□□ -2.23
SCAPERQ9BY12 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.1□□□□□ -2.23
SCAPERQ9BY12 AC093752.1-206ENST00000511823 336 ntBASIC1.1□□□□□ -2.23
SCAPERQ9BY12 Y_RNA.681-201ENST00000516445 113 ntBASIC1.1□□□□□ -2.23
SCAPERQ9BY12 MTCYBP27-201ENST00000555160 670 ntBASIC1.1□□□□□ -2.23
SCAPERQ9BY12 AL133241.1-201ENST00000556832 487 ntBASIC1.1□□□□□ -2.23
SCAPERQ9BY12 SULT1C2P1-202ENST00000562418 459 ntBASIC1.1□□□□□ -2.23
SCAPERQ9BY12 AC091925.1-201ENST00000623204 462 ntBASIC1.1□□□□□ -2.23
SCAPERQ9BY12 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
SCAPERQ9BY12 AC099548.1-201ENST00000421443 426 ntBASIC1.09□□□□□ -2.23
SCAPERQ9BY12 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.09□□□□□ -2.23
SCAPERQ9BY12 MICF-203ENST00000432679 129 ntBASIC1.09□□□□□ -2.23
SCAPERQ9BY12 AC097499.1-201ENST00000444277 208 ntBASIC1.09□□□□□ -2.23
SCAPERQ9BY12 AC079448.1-201ENST00000449377 373 ntBASIC1.09□□□□□ -2.23
SCAPERQ9BY12 AC147055.4-201ENST00000504399 745 ntBASIC1.09□□□□□ -2.23
SCAPERQ9BY12 RNU6-798P-201ENST00000516912 103 ntBASIC1.09□□□□□ -2.23
SCAPERQ9BY12 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.09□□□□□ -2.23
SCAPERQ9BY12 AC104229.1-201ENST00000561364 255 ntBASIC1.09□□□□□ -2.23
SCAPERQ9BY12 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
SCAPERQ9BY12 AC008163.1-202ENST00000636004 2889 ntBASIC1.09□□□□□ -2.24
SCAPERQ9BY12 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.08□□□□□ -2.24
SCAPERQ9BY12 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.08□□□□□ -2.24
SCAPERQ9BY12 HMGB1P9-201ENST00000429856 646 ntBASIC1.08□□□□□ -2.24
SCAPERQ9BY12 RPL7P29-201ENST00000437151 728 ntBASIC1.08□□□□□ -2.24
SCAPERQ9BY12 AC104164.3-201ENST00000467363 1258 ntBASIC1.08□□□□□ -2.24
SCAPERQ9BY12 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SCAPERQ9BY12 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SCAPERQ9BY12 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.08□□□□□ -2.24
SCAPERQ9BY12 MIR892C-201ENST00000516410 77 ntBASIC1.08□□□□□ -2.24
SCAPERQ9BY12 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.08□□□□□ -2.24
SCAPERQ9BY12 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.08□□□□□ -2.24
SCAPERQ9BY12 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.08□□□□□ -2.24
SCAPERQ9BY12 CYP4A27P-201ENST00000567218 190 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms