Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 MTND3P9-201ENST00000429526 346 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AC011276.1-201ENST00000469688 323 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 HMGN1P11-201ENST00000508668 303 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AC087441.2-201ENST00000529141 262 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 CBX3P4-201ENST00000538909 354 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 SYF2P1-201ENST00000550658 413 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AC006077.1-201ENST00000604746 343 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AC123912.5-201ENST00000605470 343 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 Y_RNA.772-201ENST00000606692 102 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 MIR8076-201ENST00000611401 83 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.81
SSBP3Q9BWW4 SAGE2P-201ENST00000420011 2126 ntBASIC3.71□□□□□ -1.81
SSBP3Q9BWW4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
SSBP3Q9BWW4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.71□□□□□ -1.81
SSBP3Q9BWW4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 MIR411-201ENST00000362239 96 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 Y_RNA.16-201ENST00000362421 102 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 Y_RNA.143-201ENST00000363520 106 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 MIR301A-201ENST00000385261 86 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC009237.10-201ENST00000414112 510 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 TMSB10P2-201ENST00000416049 131 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 Z74021.1-201ENST00000423610 407 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AL732292.1-201ENST00000426692 226 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AL451062.2-201ENST00000427515 271 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 RPL26P6-201ENST00000440913 438 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 PHBP16-201ENST00000446318 950 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC013470.1-201ENST00000453438 462 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 RN7SKP210-201ENST00000459176 261 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 RPS23P7-201ENST00000466210 444 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 RN7SL385P-201ENST00000468873 276 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC010469.2-201ENST00000496412 480 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC107393.1-201ENST00000512403 346 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AL590705.4-201ENST00000532209 134 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC024405.2-202ENST00000532731 184 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC136932.1-201ENST00000574771 208 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 MIR4716-201ENST00000579628 84 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC034102.8-201ENST00000615146 484 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 RMST_4.1-201ENST00000616886 107 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 MIR6758-201ENST00000620653 63 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 MIR6810-201ENST00000622701 70 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 Z99571.1-201ENST00000636677 394 ntBASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SSBP3Q9BWW4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 MIR921-201ENST00000401133 56 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 HDGFP1-201ENST00000405943 252 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 AC007389.2-201ENST00000434630 306 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 RPS20P1-201ENST00000434853 354 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 MIR2355-201ENST00000517199 87 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 RPL21P7-201ENST00000557463 483 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 MIR1273C-201ENST00000578669 77 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 MIR4697-201ENST00000582977 78 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 MIR4512-201ENST00000583257 77 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 AC098826.3-201ENST00000603823 466 ntBASIC3.7□□□□□ -1.82
SSBP3Q9BWW4 AC009314.1-201ENST00000603871 304 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms