Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MIR548P-201ENST00000408336 84 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 MTND3P9-201ENST00000429526 346 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 Y_RNA.631-201ENST00000459607 101 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 SNORA31.18-201ENST00000517043 134 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 AC022634.1-201ENST00000520765 532 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 CR383656.8-201ENST00000549046 145 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 AC091516.1-201ENST00000549191 703 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 BNIP3P16-201ENST00000589779 534 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 BPIFA4P-203ENST00000603168 689 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.9□□□□□ -1.62
TRAIPQ9BWF2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRAIPQ9BWF2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRAIPQ9BWF2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.9□□□□□ -1.62
TRAIPQ9BWF2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRAIPQ9BWF2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
TRAIPQ9BWF2 Y_RNA.138-201ENST00000363462 102 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 RN7SKP227-201ENST00000364445 330 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 RNU6-1040P-201ENST00000383974 107 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 MIR559-201ENST00000385188 96 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 FTH1P15-201ENST00000406984 280 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 AC009237.10-201ENST00000414112 510 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 AC004975.1-201ENST00000428733 208 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 Y_RNA.639-201ENST00000458981 102 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 AC107626.1-201ENST00000471084 183 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 RN7SL817P-201ENST00000480777 288 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 PTP4A1P4-201ENST00000512479 322 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 RNU6-976P-201ENST00000516086 111 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 AC015912.2-201ENST00000571053 181 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 AC009163.5-201ENST00000575421 637 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 AC005046.1-201ENST00000608515 625 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 AC114781.5-201ENST00000615297 108 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 MIR6891-201ENST00000618788 93 ntBASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.9□□□□□ -1.63
TRAIPQ9BWF2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 RNU6-227P-201ENST00000362865 103 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 RNU6-942P-201ENST00000363002 107 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 U8.8-201ENST00000365399 135 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 RNU1-64P-201ENST00000365443 163 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 SNORD42.2-201ENST00000365570 69 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 RNU6-19P-201ENST00000384718 107 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 RNU6-331P-201ENST00000384724 107 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 Z74021.1-201ENST00000423610 407 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 AC011998.1-201ENST00000433403 117 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 MIR2053-201ENST00000459295 91 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 RPL23AP65-201ENST00000475608 468 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 AC069499.1-201ENST00000489433 509 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 AC091167.1-201ENST00000492017 396 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 SCARNA16.2-201ENST00000516520 172 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 SNORD19.2-201ENST00000516978 73 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 MIR3939-201ENST00000582614 106 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 AC024220.1-201ENST00000603675 484 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 Y_RNA.812-201ENST00000610788 101 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 Y_RNA.784-201ENST00000613803 101 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 Y_RNA.787-201ENST00000616522 101 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 Y_RNA.780-201ENST00000617336 101 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 AL445567.2-201ENST00000618935 498 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 Y_RNA.801-201ENST00000619005 101 ntBASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRAIPQ9BWF2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AC010733.2-201ENST00000589496 5702 ntBASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.88□□□□□ -1.63
TRAIPQ9BWF2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms