Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 OR56A5-201ENST00000340110 738 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.31-201ENST00000362574 102 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 SNORD35B-201ENST00000363660 87 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 RNU6-522P-201ENST00000364497 107 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 RNU6-7-201ENST00000364784 107 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.339-201ENST00000365325 102 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 RNU6-8-201ENST00000365467 107 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.373-201ENST00000365600 103 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 RNA5SP151-201ENST00000365632 117 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 RNU6-1105P-201ENST00000384774 107 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 RNU6-550P-201ENST00000391057 101 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AL356057.3-201ENST00000402607 340 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 Z85995.1-201ENST00000415547 335 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 CYCSP4-201ENST00000429682 331 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AC108059.2-201ENST00000434626 151 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.635-201ENST00000459041 101 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 RPL21P11-201ENST00000461458 483 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 MTND4P7-201ENST00000523876 130 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AL137161.1-201ENST00000532231 390 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AL163153.1-201ENST00000554223 283 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AL121576.1-201ENST00000556055 276 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 MIR4276-201ENST00000584832 70 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AC006006.1-201ENST00000603082 144 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 APOOP1-201ENST00000604695 592 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AC019193.3-201ENST00000609144 554 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AL110115.1-201ENST00000614396 364 ntBASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN3Q9BTN0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AC022336.2-201ENST00000568966 2538 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 CUL1P1-201ENST00000509510 2425 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 RNA5SP399-201ENST00000364003 117 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.245-201ENST00000364493 95 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 RNU4-66P-201ENST00000365199 138 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 SNORA48.8-201ENST00000391324 134 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AL592291.1-201ENST00000403830 352 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AC113618.1-201ENST00000416747 285 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AL358176.2-201ENST00000425769 204 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AC104058.1-201ENST00000448028 297 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AL118520.1-201ENST00000450770 291 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 MTND5P22-201ENST00000458380 195 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 RNU7-152P-201ENST00000458982 64 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 RBBP4P6-201ENST00000508098 202 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 TRAV28-201ENST00000557548 323 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 AC100830.2-201ENST00000581636 240 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 MIR7106-201ENST00000612419 65 ntBASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN3Q9BTN0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AL672167.1-203ENST00000641299 2975 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 RNU6-1304P-201ENST00000411374 106 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AL160275.2-201ENST00000412010 394 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 EIF4EP1-201ENST00000422311 642 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms