Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ISCA1P1-201ENST00000426679 387 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 HMGB3P12-201ENST00000438745 556 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 MTCO1P27-201ENST00000448269 226 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 CKS1BP2-201ENST00000497342 240 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 SNORA19.3-201ENST00000516165 130 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 RNU6-467P-201ENST00000517027 110 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AC010376.1-201ENST00000522101 334 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 RANP3-201ENST00000530970 276 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AC009712.1-201ENST00000564938 316 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 ROCK1P1-201ENST00000573767 549 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 MIR3126-201ENST00000577443 74 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 PART1_2.1-201ENST00000612397 250 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AP001486.3-201ENST00000615334 372 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AL109620.1-201ENST00000618738 1197 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 MIR5739-201ENST00000619803 80 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AP003400.5-201ENST00000624827 617 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 Y_RNA.472-201ENST00000384322 102 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 SNORA64-201ENST00000384674 134 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 RNU6-278P-201ENST00000390945 109 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AL079342.1-201ENST00000401460 267 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC083875.1-201ENST00000419509 405 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC097463.2-201ENST00000421074 142 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 SDR42E1P3-201ENST00000438345 502 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 RPL7P12-201ENST00000446719 750 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AP000542.1-201ENST00000448473 371 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AL118520.1-201ENST00000450770 291 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC055731.1-201ENST00000474387 401 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 RPL36AP48-201ENST00000485521 314 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 RNU6-581P-201ENST00000516214 105 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 SNORA31.25-201ENST00000517242 134 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 OR11H5P-201ENST00000554039 926 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 YWHAZP1-201ENST00000556286 722 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 LRRC37A5P-203ENST00000580181 585 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AP001269.3-201ENST00000588718 329 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC007229.1-201ENST00000590455 412 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC078899.2-201ENST00000595282 212 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC073544.2-201ENST00000601155 540 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AL355297.2-201ENST00000604792 129 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AF129408.1-201ENST00000608767 431 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC010378.1-201ENST00000619270 362 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AC244517.12-201ENST00000623581 663 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 AL160394.1-201ENST00000624765 724 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 U6.99-201ENST00000637524 83 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 Z75746.1-201ENST00000440243 2080 ntBASIC1.44□□□□□ -2.18
UPK3BQ9BT76 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
UPK3BQ9BT76 MTND5P33-201ENST00000571250 1450 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC009487.4-201ENST00000624969 3585 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 RNA5SP88-201ENST00000365560 109 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 MIR19A-201ENST00000384878 82 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AL359634.1-202ENST00000404721 284 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 MIR1302-8-201ENST00000408342 128 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 RN7SKP32-201ENST00000410167 303 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 HMGB1P11-201ENST00000413899 637 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC019070.1-201ENST00000415008 1024 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 ZNF90P2-204ENST00000419323 1075 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AL445646.1-201ENST00000431784 216 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 RPL23AP7-203ENST00000449021 469 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 OR6C5P-201ENST00000452388 923 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 CYP2C59P-201ENST00000457790 269 ntBASIC1.43□□□□□ -2.18
UPK3BQ9BT76 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3BQ9BT76 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms