Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 CENPUP1-201ENST00000526649 1202 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AC005730.3-201ENST00000583067 366 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AL157817.1-201ENST00000614264 790 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AL162274.2-201ENST00000614406 332 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 SNORD39.4-201ENST00000620099 78 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AC006504.8-201ENST00000621046 635 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 DUXAP9-208ENST00000622815 614 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 CUL1P1-201ENST00000509510 2425 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AF127577.6-201ENST00000623352 2191 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 MIR30E-201ENST00000362104 92 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 SNORA72.1-201ENST00000363485 129 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 SNORA4.3-201ENST00000365564 137 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 Y_RNA.373-201ENST00000365600 103 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 RNU6-38P-201ENST00000384085 107 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 AL592114.1-201ENST00000403842 483 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 EEF1A1P40-201ENST00000412883 573 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 CECR9-201ENST00000453421 199 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 RNU6-333P-201ENST00000459117 107 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 AP001486.1-201ENST00000463339 476 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 LRRC34P2-201ENST00000514850 553 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 CASP1P1-201ENST00000526345 212 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 PSMA2P1-201ENST00000526365 646 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 MIR5692A1-201ENST00000580523 69 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 MIR5583-1-201ENST00000580941 59 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 UBL5P2-201ENST00000583788 219 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 AL035413.2-201ENST00000604801 525 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 RNU6-89P-201ENST00000606519 100 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 AC009570.1-201ENST00000609599 745 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 AC017071.1-201ENST00000564407 2204 ntBASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
PAAF1Q9BRP4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AL049641.1-201ENST00000441055 1948 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 MIR422A-201ENST00000362286 90 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 RNU6-867P-201ENST00000364956 107 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 RNU4-20P-201ENST00000365601 151 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 RNU6-393P-201ENST00000384475 107 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 Y_RNA.534-201ENST00000384599 112 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 SNORD70.1-201ENST00000391007 85 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AL049873.1-201ENST00000480540 376 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AC114786.4-201ENST00000508771 728 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 SCARNA13-201ENST00000516672 275 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AC022690.1-201ENST00000526681 550 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AC078814.3-201ENST00000553036 491 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 MIR4644-201ENST00000579929 84 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AC011712.1-201ENST00000588959 234 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 AL137843.1-201ENST00000605078 385 ntBASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PAAF1Q9BRP4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 Y_RNA.303-201ENST00000364998 94 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 RNU6-715P-201ENST00000365204 103 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 SNORA32.2-201ENST00000384049 122 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms