Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMOQ99835 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMOQ99835 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SMOQ99835 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMOQ99835 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMOQ99835 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMOQ99835 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMOQ99835 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.7□□□□□ -1.82
SMOQ99835 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMOQ99835 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMOQ99835 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
SMOQ99835 RNU4-35P-201ENST00000362588 141 ntBASIC3.7□□□□□ -1.82
SMOQ99835 RNU6-512P-201ENST00000364438 103 ntBASIC3.7□□□□□ -1.82
SMOQ99835 RNU6-1303P-201ENST00000364841 107 ntBASIC3.7□□□□□ -1.82
SMOQ99835 SNORD6-201ENST00000365444 73 ntBASIC3.7□□□□□ -1.82
SMOQ99835 SNORA4.3-201ENST00000365564 137 ntBASIC3.7□□□□□ -1.82
SMOQ99835 RNU6-45P-201ENST00000384471 107 ntBASIC3.7□□□□□ -1.82
SMOQ99835 SNORD17-201ENST00000390930 237 ntBASIC3.7□□□□□ -1.82
SMOQ99835 MIR450B-201ENST00000401182 78 ntBASIC3.7□□□□□ -1.82
SMOQ99835 AL159987.2-201ENST00000432754 307 ntBASIC3.7□□□□□ -1.82
SMOQ99835 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.7□□□□□ -1.82
SMOQ99835 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.7□□□□□ -1.82
SMOQ99835 AL118496.2-201ENST00000448300 230 ntBASIC3.7□□□□□ -1.82
SMOQ99835 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.7□□□□□ -1.82
SMOQ99835 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.7□□□□□ -1.82
SMOQ99835 AC087588.1-201ENST00000462203 316 ntBASIC3.7□□□□□ -1.82
SMOQ99835 RN7SL594P-201ENST00000470590 287 ntBASIC3.7□□□□□ -1.82
SMOQ99835 AC104136.1-201ENST00000512969 394 ntBASIC3.7□□□□□ -1.82
SMOQ99835 RNU6-559P-201ENST00000516151 98 ntBASIC3.7□□□□□ -1.82
SMOQ99835 SNORA70.14-201ENST00000516205 110 ntBASIC3.7□□□□□ -1.82
SMOQ99835 SNORA31.8-201ENST00000516327 108 ntBASIC3.7□□□□□ -1.82
SMOQ99835 RNU6-1069P-201ENST00000516612 133 ntBASIC3.7□□□□□ -1.82
SMOQ99835 RNA5SP454-201ENST00000517231 127 ntBASIC3.7□□□□□ -1.82
SMOQ99835 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.7□□□□□ -1.82
SMOQ99835 COPS8P3-201ENST00000526024 482 ntBASIC3.7□□□□□ -1.82
SMOQ99835 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.7□□□□□ -1.82
SMOQ99835 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.7□□□□□ -1.82
SMOQ99835 AC004024.1-201ENST00000549244 247 ntBASIC3.7□□□□□ -1.82
SMOQ99835 AC107016.1-201ENST00000550463 337 ntBASIC3.7□□□□□ -1.82
SMOQ99835 MIR4790-201ENST00000577799 79 ntBASIC3.7□□□□□ -1.82
SMOQ99835 AC006270.2-201ENST00000578523 652 ntBASIC3.7□□□□□ -1.82
SMOQ99835 MIR4644-201ENST00000579929 84 ntBASIC3.7□□□□□ -1.82
SMOQ99835 AC023043.2-201ENST00000589678 1026 ntBASIC3.7□□□□□ -1.82
SMOQ99835 AC069200.1-201ENST00000609511 323 ntBASIC3.7□□□□□ -1.82
SMOQ99835 MIR7851-201ENST00000610611 160 ntBASIC3.7□□□□□ -1.82
SMOQ99835 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.7□□□□□ -1.82
SMOQ99835 Z99571.1-201ENST00000636677 394 ntBASIC3.7□□□□□ -1.82
SMOQ99835 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
SMOQ99835 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.7□□□□□ -1.82
SMOQ99835 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMOQ99835 AL049781.1-201ENST00000623195 3585 ntBASIC3.7□□□□□ -1.82
SMOQ99835 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMOQ99835 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMOQ99835 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMOQ99835 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMOQ99835 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SMOQ99835 Y_RNA.138-201ENST00000363462 102 ntBASIC3.69□□□□□ -1.82
SMOQ99835 Y_RNA.212-201ENST00000364177 102 ntBASIC3.69□□□□□ -1.82
SMOQ99835 Y_RNA.259-201ENST00000364619 101 ntBASIC3.69□□□□□ -1.82
SMOQ99835 Y_RNA.431-201ENST00000384086 102 ntBASIC3.69□□□□□ -1.82
SMOQ99835 SNORD116-29-201ENST00000384516 83 ntBASIC3.69□□□□□ -1.82
SMOQ99835 MIR578-201ENST00000384828 96 ntBASIC3.69□□□□□ -1.82
SMOQ99835 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SMOQ99835 SNORA11.1-201ENST00000408133 129 ntBASIC3.69□□□□□ -1.82
SMOQ99835 Z85995.1-201ENST00000415547 335 ntBASIC3.69□□□□□ -1.82
SMOQ99835 RPL21P90-201ENST00000415692 466 ntBASIC3.69□□□□□ -1.82
SMOQ99835 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.69□□□□□ -1.82
SMOQ99835 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.69□□□□□ -1.82
SMOQ99835 AF228730.4-201ENST00000421457 183 ntBASIC3.69□□□□□ -1.82
SMOQ99835 AC006989.1-201ENST00000427212 131 ntBASIC3.69□□□□□ -1.82
SMOQ99835 SAR1AP4-201ENST00000429225 591 ntBASIC3.69□□□□□ -1.82
SMOQ99835 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.69□□□□□ -1.82
SMOQ99835 RPS24P13-201ENST00000442520 397 ntBASIC3.69□□□□□ -1.82
SMOQ99835 AC008264.1-201ENST00000447612 367 ntBASIC3.69□□□□□ -1.82
SMOQ99835 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.69□□□□□ -1.82
SMOQ99835 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.69□□□□□ -1.82
SMOQ99835 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMOQ99835 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.69□□□□□ -1.82
SMOQ99835 AL359273.1-201ENST00000510918 627 ntBASIC3.69□□□□□ -1.82
SMOQ99835 SNORA70.16-201ENST00000516390 95 ntBASIC3.69□□□□□ -1.82
SMOQ99835 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.69□□□□□ -1.82
SMOQ99835 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.69□□□□□ -1.82
SMOQ99835 MIR3921-201ENST00000577308 85 ntBASIC3.69□□□□□ -1.82
SMOQ99835 MIR3941-201ENST00000582572 103 ntBASIC3.69□□□□□ -1.82
SMOQ99835 AC073539.2-201ENST00000597113 165 ntBASIC3.69□□□□□ -1.82
SMOQ99835 AC012531.5-201ENST00000611375 151 ntBASIC3.69□□□□□ -1.82
SMOQ99835 AC019176.2-201ENST00000611579 315 ntBASIC3.69□□□□□ -1.82
SMOQ99835 AL138726.1-201ENST00000614873 333 ntBASIC3.69□□□□□ -1.82
SMOQ99835 AC090132.2-201ENST00000615881 347 ntBASIC3.69□□□□□ -1.82
SMOQ99835 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.69□□□□□ -1.82
SMOQ99835 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.69□□□□□ -1.82
SMOQ99835 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.69□□□□□ -1.82
SMOQ99835 MTND4LP32-201ENST00000636111 270 ntBASIC3.69□□□□□ -1.82
SMOQ99835 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SMOQ99835 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.69□□□□□ -1.82
SMOQ99835 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMOQ99835 MTCO1P12-201ENST00000414273 1543 ntBASIC3.69□□□□□ -1.82
SMOQ99835 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SMOQ99835 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.69□□□□□ -1.82
SMOQ99835 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms