Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC005786.1-201ENST00000588553 154 ntBASIC1.28□□□□□ -2.2
IFT140Q96RY7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.28□□□□□ -2.2
IFT140Q96RY7 AC025588.2-201ENST00000604851 466 ntBASIC1.28□□□□□ -2.2
IFT140Q96RY7 AC073968.1-201ENST00000618594 637 ntBASIC1.28□□□□□ -2.2
IFT140Q96RY7 AP003399.1-201ENST00000637534 361 ntBASIC1.28□□□□□ -2.2
IFT140Q96RY7 RNU6-16P-201ENST00000384385 107 ntBASIC1.27□□□□□ -2.21
IFT140Q96RY7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.27□□□□□ -2.21
IFT140Q96RY7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.27□□□□□ -2.21
IFT140Q96RY7 AC012497.1-201ENST00000429392 575 ntBASIC1.27□□□□□ -2.21
IFT140Q96RY7 GTF2IP20-201ENST00000431663 360 ntBASIC1.27□□□□□ -2.21
IFT140Q96RY7 AL591704.1-201ENST00000432574 275 ntBASIC1.27□□□□□ -2.21
IFT140Q96RY7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.27□□□□□ -2.21
IFT140Q96RY7 Z82190.1-201ENST00000454534 490 ntBASIC1.27□□□□□ -2.21
IFT140Q96RY7 AC147055.4-201ENST00000504399 745 ntBASIC1.27□□□□□ -2.21
IFT140Q96RY7 AP005639.2-201ENST00000527592 928 ntBASIC1.27□□□□□ -2.21
IFT140Q96RY7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.27□□□□□ -2.21
IFT140Q96RY7 MIR5571-201ENST00000577998 113 ntBASIC1.27□□□□□ -2.21
IFT140Q96RY7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
IFT140Q96RY7 RNU4-23P-201ENST00000362839 140 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 SNORD114-2-201ENST00000363953 78 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 AL139397.2-201ENST00000404529 772 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.26□□□□□ -2.21
IFT140Q96RY7 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.26□□□□□ -2.21
IFT140Q96RY7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.26□□□□□ -2.21
IFT140Q96RY7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.26□□□□□ -2.21
IFT140Q96RY7 RPL23AP3-201ENST00000453844 468 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 DUXAP8-207ENST00000456786 622 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 RNU6-420P-201ENST00000458780 107 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.26□□□□□ -2.21
IFT140Q96RY7 AC117525.1-201ENST00000515228 503 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 SNORA31.25-201ENST00000517242 134 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 C1DP5-201ENST00000525775 383 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 OR5AL2P-201ENST00000532185 920 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 AC004812.1-201ENST00000540773 146 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.26□□□□□ -2.21
IFT140Q96RY7 CYCSP2-201ENST00000558168 301 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.26□□□□□ -2.21
IFT140Q96RY7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 MIR6835-201ENST00000621552 64 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 AC073308.1-201ENST00000623696 305 ntBASIC1.26□□□□□ -2.21
IFT140Q96RY7 MIR934-201ENST00000401241 83 ntBASIC1.25□□□□□ -2.21
IFT140Q96RY7 AC010385.1-201ENST00000412374 256 ntBASIC1.25□□□□□ -2.21
IFT140Q96RY7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.25□□□□□ -2.21
IFT140Q96RY7 FO393419.3-201ENST00000428741 282 ntBASIC1.25□□□□□ -2.21
IFT140Q96RY7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.25□□□□□ -2.21
IFT140Q96RY7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.25□□□□□ -2.21
IFT140Q96RY7 AC112518.2-201ENST00000508565 425 ntBASIC1.25□□□□□ -2.21
IFT140Q96RY7 LRRC34P2-201ENST00000514850 553 ntBASIC1.25□□□□□ -2.21
IFT140Q96RY7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
IFT140Q96RY7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.25□□□□□ -2.21
IFT140Q96RY7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
IFT140Q96RY7 RNU2-41P-201ENST00000410991 178 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 RNA5SP127-201ENST00000411051 133 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 SFR1P2-201ENST00000421841 730 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 HSPE1P21-201ENST00000438283 308 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 DYNLL1P5-201ENST00000467158 270 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 RPL30P5-201ENST00000494923 336 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC104997.1-201ENST00000519761 717 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC036111.3-201ENST00000526389 112 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 AP000254.1-201ENST00000609934 520 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC079791.1-201ENST00000605356 973 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC009229.3-201ENST00000608056 282 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC007038.2-201ENST00000608095 740 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 AP005212.4-201ENST00000614206 710 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC040168.1-201ENST00000623594 991 ntBASIC1.24□□□□□ -2.21
IFT140Q96RY7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.24□□□□□ -2.21
IFT140Q96RY7 BTF3L4P2-201ENST00000392798 346 ntBASIC1.23□□□□□ -2.21
IFT140Q96RY7 RNU6-1328P-201ENST00000410938 106 ntBASIC1.23□□□□□ -2.21
IFT140Q96RY7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.23□□□□□ -2.21
IFT140Q96RY7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.23□□□□□ -2.21
IFT140Q96RY7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.23□□□□□ -2.21
IFT140Q96RY7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.23□□□□□ -2.21
IFT140Q96RY7 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.23□□□□□ -2.21
IFT140Q96RY7 RNU6-496P-201ENST00000516145 99 ntBASIC1.23□□□□□ -2.21
IFT140Q96RY7 SCARNA11.3-201ENST00000517276 130 ntBASIC1.23□□□□□ -2.21
IFT140Q96RY7 MTCYBP27-201ENST00000555160 670 ntBASIC1.23□□□□□ -2.21
IFT140Q96RY7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.23□□□□□ -2.21
IFT140Q96RY7 AC006270.3-201ENST00000605967 1036 ntBASIC1.23□□□□□ -2.21
IFT140Q96RY7 ZNF702P-202ENST00000434269 1966 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
IFT140Q96RY7 RNA5SP276-201ENST00000362580 94 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 RNU6-1035P-201ENST00000384477 107 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.22□□□□□ -2.21
IFT140Q96RY7 snoU109.1-201ENST00000459339 135 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 AC025459.1-201ENST00000504072 156 ntBASIC1.22□□□□□ -2.21
IFT140Q96RY7 RNU6-488P-201ENST00000515918 99 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms