Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 SNORA25B-201ENST00000365507 128 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 AC097463.2-201ENST00000421074 142 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC42Q96M95 MTND2P29-201ENST00000438595 412 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 USP9YP22-201ENST00000438971 294 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 MTCO1P53-201ENST00000441633 699 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 MRPL42P4-201ENST00000453267 443 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 CECR9-201ENST00000453421 199 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.51□□□□□ -2.17
CCDC42Q96M95 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC42Q96M95 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC42Q96M95 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC42Q96M95 RNU6-1102P-201ENST00000516149 96 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC42Q96M95 AC090079.2-201ENST00000575289 768 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.51□□□□□ -2.17
CCDC42Q96M95 AC100814.1-201ENST00000606963 623 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 AC103810.8-201ENST00000607347 118 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC42Q96M95 AL109620.1-201ENST00000618738 1197 ntBASIC1.51□□□□□ -2.17
CCDC42Q96M95 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC42Q96M95 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CCDC42Q96M95 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
CCDC42Q96M95 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC42Q96M95 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC42Q96M95 RNU6-60P-201ENST00000364792 103 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
CCDC42Q96M95 U6.112-201ENST00000384129 70 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 MIR561-201ENST00000385216 97 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 MIR934-201ENST00000401241 83 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 TXNP7-201ENST00000406296 293 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC42Q96M95 RPL7P34-201ENST00000433316 712 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 HMGN2P3-201ENST00000433603 273 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 HMGN2P5-201ENST00000436882 273 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 AC021146.2-201ENST00000504736 556 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 AC116337.1-201ENST00000509680 687 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 TPT1P8-201ENST00000510120 555 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 SNORA48.11-201ENST00000517015 89 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 AC034114.1-201ENST00000520293 285 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 AL121821.2-201ENST00000556081 394 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 AC044913.1-201ENST00000557200 430 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 AC015720.1-201ENST00000565251 277 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC42Q96M95 AL355598.1-201ENST00000604169 202 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 DUSP12P1-201ENST00000612874 516 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 AC010975.3-201ENST00000618727 978 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 AC091304.6-201ENST00000619761 202 ntBASIC1.5□□□□□ -2.17
CCDC42Q96M95 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC42Q96M95 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 RNA5SP190-201ENST00000365222 118 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 RNU6-754P-201ENST00000391166 107 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 RNU2-68P-201ENST00000410878 191 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 AL449283.1-202ENST00000418249 604 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 CYCSP49-201ENST00000420810 319 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 HMGB3P12-201ENST00000438745 556 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 AC118469.1-201ENST00000442943 488 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 MTND1P9-201ENST00000453775 944 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 AC018868.1-201ENST00000491307 315 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 MTCYBP35-201ENST00000503630 1137 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 AC114981.1-201ENST00000503897 678 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 RNU6-714P-201ENST00000516963 103 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 RNA5SP165-201ENST00000517142 115 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 ARL2BPP2-201ENST00000550907 489 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 MRPS36P5-201ENST00000551909 298 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 AL160236.1-201ENST00000556317 195 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 AC026271.5-201ENST00000577873 130 ntBASIC1.49□□□□□ -2.17
CCDC42Q96M95 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CCDC42Q96M95 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC42Q96M95 RNU4-13P-201ENST00000364019 141 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 RNA5SP126-201ENST00000365092 109 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 MIR758-201ENST00000390227 88 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 RPL22P22-201ENST00000395439 379 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC42Q96M95 MTCO3P46-201ENST00000425787 232 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 DEFB130D-201ENST00000426866 237 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC42Q96M95 AC010153.1-201ENST00000432862 727 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 MTCYBP15-201ENST00000433123 1127 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 RPL32P28-201ENST00000443577 397 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 SEPT14P24-201ENST00000447236 180 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC42Q96M95 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC42Q96M95 RPL36AP48-201ENST00000485521 314 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.48□□□□□ -2.17
CCDC42Q96M95 RNU6-927P-201ENST00000516199 100 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 NDUFA5P6-201ENST00000542110 379 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 AC090330.1-201ENST00000588646 764 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 AP005229.2-201ENST00000609980 697 ntBASIC1.48□□□□□ -2.17
CCDC42Q96M95 AC009268.2-201ENST00000621925 457 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms