Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU6-579P-201ENST00000516879 102 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 MIR4424-201ENST00000585257 86 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 AL645944.1-201ENST00000603857 493 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 AL160394.1-201ENST00000624765 724 ntBASIC3.54□□□□□ -1.84
CCDC138Q96M89 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC138Q96M89 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC138Q96M89 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC138Q96M89 RNU1-105P-201ENST00000363470 161 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 RNY3P3-201ENST00000363816 102 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 SNORA73.2-201ENST00000364946 201 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 RNU6-166P-201ENST00000384371 107 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 Y_RNA.623-201ENST00000411128 95 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 AL353621.1-201ENST00000418219 243 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AL627311.1-201ENST00000431514 115 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC092989.1-201ENST00000481235 277 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC091885.1-201ENST00000506658 268 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 TRMT10BP1-201ENST00000519377 943 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC022634.1-201ENST00000520765 532 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 SUB1P1-201ENST00000524415 382 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 BNIP3P6-201ENST00000549284 499 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 LINC00933-203ENST00000559812 219 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC012119.1-201ENST00000603184 222 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC006077.1-201ENST00000604746 343 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC007014.2-201ENST00000615581 479 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 CR392039.5-201ENST00000623201 510 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC012442.3-202ENST00000636742 206 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC138Q96M89 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC008669.1-201ENST00000565823 2178 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC103988.1-201ENST00000566382 2177 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC138Q96M89 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC138Q96M89 AC110774.1-201ENST00000623567 2018 ntBASIC3.53□□□□□ -1.84
CCDC138Q96M89 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
CCDC138Q96M89 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC138Q96M89 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CCDC138Q96M89 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC138Q96M89 Y_RNA.89-201ENST00000363031 102 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 RNA5SP139-201ENST00000364340 117 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 RNA5SP51-201ENST00000364750 119 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 RNU6-877P-201ENST00000383868 107 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 RNU6-1027P-201ENST00000383998 107 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 MIR554-201ENST00000384874 96 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 AL592114.1-201ENST00000403842 483 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 MIR1277-201ENST00000408536 78 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC138Q96M89 AC245291.1-201ENST00000419501 328 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 SNRPEP10-201ENST00000420249 274 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 AC005300.1-201ENST00000428401 373 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC138Q96M89 RPS15AP5-201ENST00000436276 388 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 RPS3AP46-201ENST00000448352 682 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 MRPS31P2-201ENST00000451581 518 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC138Q96M89 RPL38P4-201ENST00000502376 214 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC138Q96M89 AC074344.1-201ENST00000512823 224 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 AC010265.1-201ENST00000513509 211 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 NDUFB9P3-201ENST00000521269 501 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 CYCSP39-201ENST00000565821 309 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 AL451007.1-201ENST00000595491 289 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 AC073539.2-201ENST00000597113 165 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC138Q96M89 AC022418.1-201ENST00000624118 445 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 MIR3199-2-201ENST00000636243 86 ntBASIC3.52□□□□□ -1.85
CCDC138Q96M89 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC138Q96M89 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC138Q96M89 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC138Q96M89 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCDC138Q96M89 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC138Q96M89 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC138Q96M89 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC138Q96M89 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC138Q96M89 SNORD3E-201ENST00000362899 217 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms