Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MIR423-201ENST00000362201 94 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 Y_RNA.133-201ENST00000363428 110 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 RNU6-639P-201ENST00000384074 107 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 RNU6-45P-201ENST00000384471 107 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 Y_RNA.534-201ENST00000384599 112 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 MIR199A2-201ENST00000385289 110 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AC244098.2-201ENST00000422068 99 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AC018865.2-201ENST00000423631 129 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 HIGD1AP11-201ENST00000438361 280 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 PRDX3P3-201ENST00000447765 522 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 RNU6-953P-201ENST00000459154 107 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 RPL21P41-201ENST00000459863 264 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AC116337.1-201ENST00000509680 687 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AC026782.1-201ENST00000512952 449 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1016P-201ENST00000516689 94 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 BDH2P1-201ENST00000602288 736 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AC007938.3-201ENST00000604965 623 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 SNORA62.6-201ENST00000606322 83 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 AL079305.1-201ENST00000623159 3008 ntBASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.37□□□□□ -1.71
CHAMP1Q96JM3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 Y_RNA.148-201ENST00000363557 117 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 RNU6-95P-201ENST00000384697 107 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 RPL21P65-201ENST00000406094 466 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC080125.1-201ENST00000414888 684 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 BX842559.1-201ENST00000419615 532 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC021146.2-201ENST00000504736 556 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC097473.1-201ENST00000508142 408 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 PTP4A1P4-201ENST00000512479 322 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 RPL23AP94-201ENST00000512518 302 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 RNU6-840P-201ENST00000517275 65 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 RNU6-323P-201ENST00000521915 107 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 MIR5685-201ENST00000579080 79 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 MIR4738-201ENST00000579134 87 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 MIR3671-201ENST00000580455 88 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 AC073539.2-201ENST00000597113 165 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 MIR6128-201ENST00000615528 109 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 TNPO1P3-201ENST00000436471 2662 ntBASIC4.36□□□□□ -1.71
CHAMP1Q96JM3 MTND5P16-201ENST00000460269 1703 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 SNORD3E-201ENST00000362899 217 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1303P-201ENST00000364841 107 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1040P-201ENST00000383974 107 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 Y_RNA.404-201ENST00000383978 102 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 RAC1P3-201ENST00000416129 580 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AL358176.2-201ENST00000425769 204 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AC073063.1-201ENST00000434352 607 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 TXNP1-201ENST00000441872 371 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AL360271.2-201ENST00000447710 161 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 HSPE1P6-201ENST00000479457 291 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 Y_RNA.670-201ENST00000516255 105 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 RNU6-914P-201ENST00000516749 109 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 NDUFB9P3-201ENST00000521269 501 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 AC034102.8-201ENST00000615146 484 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms