| PGAP3 | Q96FM1 | AL139147.1-201 | ENST00000502413 | 1156 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | Y_RNA.688-201 | ENST00000516565 | 95 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | SCARNA11.3-201 | ENST00000517276 | 130 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | ZDHHC20P3-201 | ENST00000531576 | 336 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | AC007368.1-201 | ENST00000536422 | 974 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | AC008114.1-201 | ENST00000544122 | 427 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | AC009145.3-201 | ENST00000567386 | 476 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | AC103810.1-201 | ENST00000579873 | 453 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | MIR3605-201 | ENST00000583214 | 100 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | AC245014.2-201 | ENST00000603689 | 287 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | AC246785.4-201 | ENST00000605374 | 287 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | AL158032.1-201 | ENST00000605401 | 106 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | AL627309.6-201 | ENST00000606857 | 840 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | LPP-221 | ENST00000618621 | 18277 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | LPP-222 | ENST00000640853 | 18277 nt | APPRIS P1 TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | HIF1A-201 | ENST00000323441 | 3555 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| PGAP3 | Q96FM1 | USP45-208 | ENST00000500704 | 5826 nt | APPRIS P1 TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | SNORD56.5-201 | ENST00000364281 | 72 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RNU6-1180P-201 | ENST00000364935 | 107 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | MIR627-201 | ENST00000384979 | 97 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | FO393413.1-201 | ENST00000402892 | 195 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RNU6-1025P-201 | ENST00000410629 | 104 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AF274573.2-201 | ENST00000437772 | 520 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AL590399.3-201 | ENST00000438072 | 543 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RPL21P2-201 | ENST00000440049 | 481 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | DPPA3P1-201 | ENST00000448050 | 469 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC003982.1-202 | ENST00000469928 | 248 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | LINC01333-201 | ENST00000508083 | 724 nt | TSL 1 (best) BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RNU6-572P-201 | ENST00000516724 | 80 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RNU6-410P-201 | ENST00000517006 | 107 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC009902.1-201 | ENST00000519351 | 183 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC025755.1-201 | ENST00000521306 | 278 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AP001189.6-201 | ENST00000528781 | 831 nt | TSL 1 (best) BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AP000462.2-203 | ENST00000540545 | 715 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC092747.1-202 | ENST00000540595 | 380 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC006199.1-201 | ENST00000548728 | 219 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AL139317.3-202 | ENST00000555689 | 528 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | CYCSP39-201 | ENST00000565821 | 309 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC024610.1-201 | ENST00000582685 | 323 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC073544.2-201 | ENST00000601155 | 540 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC064872.1-201 | ENST00000604823 | 1072 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC007938.3-201 | ENST00000604965 | 623 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC109347.2-201 | ENST00000610220 | 349 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC012409.4-201 | ENST00000612923 | 249 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC138649.3-201 | ENST00000622154 | 254 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | Z69908.1-201 | ENST00000622603 | 247 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | CU459211.1-201 | ENST00000635667 | 749 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | CD44-239 | ENST00000639002 | 528 nt | TSL 1 (best) BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | CENPE-201 | ENST00000265148 | 8612 nt | APPRIS P1 TSL 2 BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | MINDY3-202 | ENST00000378036 | 2452 nt | TSL 2 BASIC | 2.9 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | PKIB-201 | ENST00000258014 | 1595 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RPL9P7-201 | ENST00000330965 | 580 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RNU6-179P-201 | ENST00000363350 | 107 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | GPR183-201 | ENST00000376414 | 1700 nt | APPRIS P1 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | MIR181A2-201 | ENST00000384863 | 110 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RNU6-248P-201 | ENST00000410720 | 107 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RNU6-387P-201 | ENST00000411331 | 105 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RNU6-195P-201 | ENST00000411352 | 109 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC114491.1-201 | ENST00000416095 | 246 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RPL7P10-201 | ENST00000417407 | 739 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | C1DP2-201 | ENST00000418167 | 426 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | LINC01780-201 | ENST00000420059 | 442 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AL590999.1-206 | ENST00000437947 | 436 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AL117336.1-201 | ENST00000439198 | 380 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AL161651.1-201 | ENST00000440882 | 223 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | SFTA1P-203 | ENST00000446372 | 693 nt | TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC074033.2-201 | ENST00000480669 | 535 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | LAMTOR3P2-201 | ENST00000504479 | 232 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC091826.1-201 | ENST00000514065 | 313 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | SNORA9.3-201 | ENST00000516383 | 129 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | SCARNA24.1-201 | ENST00000516465 | 137 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RNA5SP367-201 | ENST00000516557 | 118 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC004944.1-201 | ENST00000517807 | 3059 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | COX6CP5-201 | ENST00000527162 | 228 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | SLC12A1-210 | ENST00000561031 | 735 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC011477.3-201 | ENST00000585571 | 403 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AL391813.1-201 | ENST00000603098 | 260 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | MIR98-201 | ENST00000606724 | 119 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | NCRUPAR_2.1-201 | ENST00000616308 | 99 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | OR13G1-202 | ENST00000642119 | 2568 nt | APPRIS P1 BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AL589740.1-207 | ENST00000607823 | 1962 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | FAM184A-202 | ENST00000352896 | 3700 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | ACTR6-212 | ENST00000552376 | 1659 nt | TSL 5 BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | LINC01419-201 | ENST00000522365 | 1521 nt | TSL 1 (best) BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | MAP3K2-203 | ENST00000409947 | 10992 nt | APPRIS P1 TSL 1 (best) BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC103710.2-202 | ENST00000641454 | 2853 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | NEBL-202 | ENST00000377122 | 9216 nt | TSL 1 (best) BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC004520.1-201 | ENST00000608362 | 1413 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | Y_RNA.22-201 | ENST00000362492 | 102 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | Y_RNA.111-201 | ENST00000363248 | 100 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RNU6-1083P-201 | ENST00000384022 | 107 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | SNORA24.1-201 | ENST00000384401 | 135 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | U3.26-201 | ENST00000391236 | 204 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | BCL2L15-203 | ENST00000393320 | 276 nt | TSL 1 (best) BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AL356057.2-201 | ENST00000403318 | 432 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AL513475.1-201 | ENST00000406602 | 315 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | MTND3P17-201 | ENST00000416968 | 344 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | RBM6-203 | ENST00000421682 | 684 nt | TSL 2 BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC026355.1-201 | ENST00000423466 | 587 nt | TSL 5 BASIC | 2.88 | □□□□□ -1.95 | | |
| PGAP3 | Q96FM1 | AC007560.1-201 | ENST00000426912 | 237 nt | BASIC | 2.88 | □□□□□ -1.95 | | |