Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RFT1Q96AA3 Y_RNA.22-201ENST00000362492 102 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 RNU6-288P-201ENST00000363690 104 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 RNY4P34-201ENST00000364779 95 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 RNU6-169P-201ENST00000365336 107 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 SNORA20.2-201ENST00000383922 131 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 SNORD67-201ENST00000390833 111 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AL356057.2-201ENST00000403318 432 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 Y_RNA.604-201ENST00000410574 102 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 MTND3P17-201ENST00000416968 344 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AL109913.1-201ENST00000421173 514 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 AL591704.1-201ENST00000432574 275 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 MTND4P25-201ENST00000441039 533 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 MTND4P18-201ENST00000447010 465 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC008571.1-201ENST00000467232 300 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 RN7SL20P-201ENST00000488827 297 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC113155.1-201ENST00000511141 769 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 RNU1-103P-201ENST00000516502 125 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 AP002453.2-201ENST00000533503 320 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC025281.1-201ENST00000567026 265 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC090578.1-201ENST00000604955 591 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC022893.3-201ENST00000607665 437 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC026241.1-201ENST00000517873 2142 ntBASIC2.66□□□□□ -1.98
RFT1Q96AA3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.66□□□□□ -1.98
RFT1Q96AA3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
RFT1Q96AA3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
RFT1Q96AA3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.65□□□□□ -1.99
RFT1Q96AA3 AL590004.2-201ENST00000404787 371 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 RNU6-193P-201ENST00000410977 107 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC127391.1-201ENST00000411737 98 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC092809.3-201ENST00000415453 231 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.65□□□□□ -1.99
RFT1Q96AA3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.65□□□□□ -1.99
RFT1Q96AA3 RPL7P37-201ENST00000425095 738 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC005300.1-201ENST00000428401 373 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 MTATP6P13-201ENST00000438531 667 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC073614.1-201ENST00000438690 650 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 MTATP6P23-201ENST00000440153 476 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC126182.1-201ENST00000478134 357 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.65□□□□□ -1.99
RFT1Q96AA3 RNU6-1220P-201ENST00000517126 108 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.65□□□□□ -1.99
RFT1Q96AA3 OR5B19P-201ENST00000531766 928 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.65□□□□□ -1.99
RFT1Q96AA3 NACAP3-201ENST00000552100 481 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC005498.1-201ENST00000592125 465 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AL133173.2-201ENST00000614270 90 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC091834.1-201ENST00000614543 472 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC090517.2-201ENST00000614966 680 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AC034229.5-201ENST00000624258 185 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 AL157786.1-207ENST00000627771 695 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 Z99571.1-201ENST00000636677 394 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RFT1Q96AA3 ASNSP3-201ENST00000451989 1306 ntBASIC2.65□□□□□ -1.99
RFT1Q96AA3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFT1Q96AA3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RFT1Q96AA3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RFT1Q96AA3 OR4G2P-201ENST00000328113 903 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 RPL9P7-201ENST00000330965 580 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RFT1Q96AA3 RNY1P12-201ENST00000364251 105 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 Y_RNA.248-201ENST00000364501 109 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 Y_RNA.390-201ENST00000383932 102 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 RNU6-195P-201ENST00000411352 109 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.64□□□□□ -1.99
RFT1Q96AA3 AC080125.1-201ENST00000414888 684 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.64□□□□□ -1.99
RFT1Q96AA3 AL358075.3-201ENST00000426289 226 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RFT1Q96AA3 AC097713.2-201ENST00000430199 356 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 MRPS10P2-201ENST00000431226 381 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 AL139415.2-201ENST00000431968 163 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 AL159987.2-201ENST00000432754 307 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 AL596276.1-201ENST00000434465 418 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.64□□□□□ -1.99
RFT1Q96AA3 RN7SL863P-201ENST00000462370 296 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 RPL9P6-201ENST00000492764 598 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 AC139453.3-201ENST00000493276 369 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 AL358832.1-201ENST00000497800 389 ntBASIC2.64□□□□□ -1.99
RFT1Q96AA3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.64□□□□□ -1.99
RFT1Q96AA3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms