Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC009570.1-201ENST00000609599 745 ntBASIC3.06□□□□□ -1.92
SLC44A1Q8WWI5 AC012409.4-201ENST00000612923 249 ntBASIC3.06□□□□□ -1.92
SLC44A1Q8WWI5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC44A1Q8WWI5 MIR3688-2-201ENST00000636963 87 ntBASIC3.06□□□□□ -1.92
SLC44A1Q8WWI5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC44A1Q8WWI5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AL035425.3-201ENST00000564206 4996 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 SNORA62.1-201ENST00000364287 154 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 U8.9-201ENST00000365667 134 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 SNORD15B-201ENST00000384714 146 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 SNORA26.7-201ENST00000391288 122 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 FAT1P1-201ENST00000406588 507 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 RPL7P10-201ENST00000417407 739 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AC093151.1-201ENST00000427711 313 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AL121769.1-201ENST00000469473 401 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 MTAPP1-201ENST00000489154 819 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 RNA5SP291-201ENST00000517222 105 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 RNU6-711P-201ENST00000517255 106 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 OR5AL2P-201ENST00000532185 920 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AC006504.3-201ENST00000586818 523 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AC006111.3-201ENST00000622137 383 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AC011155.2-201ENST00000623202 216 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 MIR622-201ENST00000638396 96 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 AC006020.1-201ENST00000420179 1854 ntBASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC44A1Q8WWI5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 RNU6-1167P-201ENST00000363227 94 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 SNORD115-7-201ENST00000365306 82 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 SNORD67-201ENST00000390833 111 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 BTF3P7-201ENST00000407097 488 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 MTCYBP5-201ENST00000423752 1135 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 CALM2P2-201ENST00000428512 440 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC104332.2-201ENST00000429959 156 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 Z82210.1-201ENST00000440037 231 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 RPL39P36-201ENST00000490784 156 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AL160314.1-201ENST00000490836 438 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 RNU6-835P-201ENST00000516974 104 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 RNA5SP503-201ENST00000517047 117 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 SNORA59B-202ENST00000578183 701 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC008752.3-201ENST00000588113 712 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC012119.1-201ENST00000603184 222 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AL162413.1-201ENST00000603198 110 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AL627309.6-201ENST00000606857 840 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AL359547.2-201ENST00000615810 418 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC007318.2-201ENST00000620999 243 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 MIR3651-201ENST00000630427 90 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 AC022336.2-201ENST00000568966 2538 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 CUL1P1-201ENST00000509510 2425 ntBASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC44A1Q8WWI5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 Y_RNA.255-201ENST00000364581 97 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 RNU6-996P-201ENST00000365438 107 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 RNU6-483P-201ENST00000384088 108 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 RNU6-1029P-201ENST00000384109 107 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 Y_RNA.576-201ENST00000384781 102 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 MIR181B1-201ENST00000385240 110 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 RNU1-101P-201ENST00000391171 127 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 MIR1277-201ENST00000408536 78 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 RPS12P24-201ENST00000412619 387 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 AC080125.1-201ENST00000414888 684 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 AL451074.5-201ENST00000415894 435 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 USP9YP27-201ENST00000418455 438 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 AL139281.1-201ENST00000422120 335 ntBASIC3.03□□□□□ -1.92
SLC44A1Q8WWI5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms