Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MIR514A3-201ENST00000385132 88 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 AL138878.1-201ENST00000405131 347 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RN7SKP111-201ENST00000410349 271 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RHEBP3-201ENST00000411920 351 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 AC063979.1-201ENST00000415539 377 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 AL353678.1-201ENST00000422735 741 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RPL36AP53-201ENST00000432891 316 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 MTND3P16-201ENST00000452205 344 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RNU6-333P-201ENST00000459117 107 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RPL21P41-201ENST00000459863 264 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RPL23AP62-201ENST00000463396 453 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RPL21P13-201ENST00000488305 481 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RN7SKP83-201ENST00000516512 178 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 PSMA2P1-201ENST00000526365 646 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 AL157871.3-201ENST00000557231 293 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 MTCO3P24-201ENST00000572729 782 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 FTX_3.1-201ENST00000610451 147 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 AC244205.2-202ENST00000635781 342 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 FAM35BP-202ENST00000497389 3337 ntBASIC3.41□□□□□ -1.86
HMGB4Q8WW32 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGB4Q8WW32 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 RNU6-270P-201ENST00000364131 105 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 UBA52P6-201ENST00000399822 382 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AL357075.1-201ENST00000404107 726 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 RNA5SP118-201ENST00000410385 109 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 SRIP2-201ENST00000428470 166 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 HMGB1P31-201ENST00000437242 427 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AC008264.1-201ENST00000447612 367 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 SCARNA18-201ENST00000459004 134 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 RPL30P14-201ENST00000482744 348 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AC116353.2-201ENST00000505332 712 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 CCDC34P1-201ENST00000507441 517 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 RNU6-358P-201ENST00000516564 75 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 RNU6-928P-201ENST00000516876 104 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AC090136.1-201ENST00000520009 240 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 MTND4P7-201ENST00000523876 130 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 HIGD1AP1-201ENST00000550979 275 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 MIR5004-201ENST00000579078 107 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 MIR4644-201ENST00000579929 84 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 MIR3609-201ENST00000582661 80 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AL035413.2-201ENST00000604801 525 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AL137843.1-201ENST00000605078 385 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AC004520.1-201ENST00000608362 1413 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 SNORD39.4-201ENST00000620099 78 ntBASIC3.4□□□□□ -1.87
HMGB4Q8WW32 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HMGB4Q8WW32 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 MFSD8-233ENST00000641482 4860 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 AC073073.2-201ENST00000609827 2578 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 Y_RNA.231-201ENST00000364358 102 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 RNU4-66P-201ENST00000365199 138 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 RNU6-715P-201ENST00000365204 103 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 RNU2-68P-201ENST00000410878 191 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 AL669831.1-202ENST00000428504 417 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 GTF2IP13-201ENST00000438487 386 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 MTCO3P18-201ENST00000440206 761 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 WASF1P1-201ENST00000447560 1131 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms