Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC027369.5-201ENST00000533838 755 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 TOMM20P2-201ENST00000540082 421 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 AC209154.1-201ENST00000582156 337 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 MIR4737-201ENST00000583979 81 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 AC116447.1-201ENST00000613153 453 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 MIR4496-201ENST00000635896 61 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 AL773545.4-201ENST00000637262 310 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 AL513478.4-201ENST00000641636 310 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 MFSD8-216ENST00000641147 4009 ntBASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SNIP1Q8TAD8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 RNU6-527P-201ENST00000363425 104 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 RNU6-768P-201ENST00000384683 107 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 MIR105-1-201ENST00000385222 81 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 MIR888-201ENST00000401186 77 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 RPS16P5-201ENST00000406501 404 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 AL121914.1-201ENST00000450188 156 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 Y_RNA.651-201ENST00000459380 103 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 AC018448.1-201ENST00000552843 316 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 AL138963.2-201ENST00000605137 226 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 AC068700.1-201ENST00000565862 3754 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 AL359955.1-201ENST00000455242 3275 ntBASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.04□□□□□ -1.6
SNIP1Q8TAD8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 AC005224.3-201ENST00000584683 2140 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 MIR450A1-201ENST00000362262 91 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 Y_RNA.251-201ENST00000364551 99 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 Y_RNA.388-201ENST00000383919 113 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 SNORA8.3-201ENST00000384679 139 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 RNU2-50P-201ENST00000410494 143 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 AC119751.6-201ENST00000416712 186 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 AC091390.3-201ENST00000426478 338 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 RPL21P66-201ENST00000426566 466 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 AC092798.1-201ENST00000458542 409 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 AC139453.3-201ENST00000493276 369 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 SNORD33.1-201ENST00000516213 88 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 RNU6-1198P-201ENST00000516904 67 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 RNA5SP373-201ENST00000517271 95 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 MIR3121-201ENST00000579680 77 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 AL391813.1-201ENST00000603098 260 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 AC010999.1-201ENST00000611856 324 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 AC083809.1-201ENST00000615051 472 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 MAPK10-263ENST00000641052 4307 ntBASIC5.03□□□□□ -1.6
SNIP1Q8TAD8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.02□□□□□ -1.61
SNIP1Q8TAD8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SNIP1Q8TAD8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SNIP1Q8TAD8 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNIP1Q8TAD8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNIP1Q8TAD8 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms