Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 LRRC34P1-201ENST00000542742 915 ntBASIC2.97□□□□□ -1.93
CCDC89Q8N998 AC023043.3-201ENST00000593113 385 ntBASIC2.97□□□□□ -1.93
CCDC89Q8N998 RNU6-91P-201ENST00000607774 107 ntBASIC2.97□□□□□ -1.93
CCDC89Q8N998 AL359198.2-201ENST00000611836 194 ntBASIC2.97□□□□□ -1.93
CCDC89Q8N998 AL603755.1-201ENST00000619504 163 ntBASIC2.97□□□□□ -1.93
CCDC89Q8N998 MIR6733-201ENST00000635723 61 ntBASIC2.97□□□□□ -1.93
CCDC89Q8N998 AC103710.2-202ENST00000641454 2853 ntBASIC2.97□□□□□ -1.93
CCDC89Q8N998 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.96□□□□□ -1.93
CCDC89Q8N998 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.93
CCDC89Q8N998 AC093536.2-201ENST00000565257 1406 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 RNU1-100P-201ENST00000365255 165 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 CYCSP48-201ENST00000417124 323 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC89Q8N998 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 ART2BP-201ENST00000453501 499 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 RPS27AP9-201ENST00000477681 438 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 AC018437.1-201ENST00000492214 406 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 MTND4P2-201ENST00000507767 1203 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 RNU5B-3P-201ENST00000516601 115 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 PSMA2P1-201ENST00000526365 646 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 MIR3682-201ENST00000581338 84 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 AL670379.10-201ENST00000604330 253 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 AL670379.9-201ENST00000605428 253 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 AC091304.9-201ENST00000612091 226 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 AC012409.4-201ENST00000612923 249 ntBASIC2.96□□□□□ -1.94
CCDC89Q8N998 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC89Q8N998 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC89Q8N998 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC89Q8N998 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC89Q8N998 MIR412-201ENST00000362142 91 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 SNORA71.3-201ENST00000362582 128 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 SNORA20.2-201ENST00000383922 131 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 RNU6-641P-201ENST00000384006 107 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 RNU1-52P-201ENST00000384190 164 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 MIR670-201ENST00000390142 98 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC89Q8N998 AL353621.1-201ENST00000418219 243 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC89Q8N998 AC003685.2-201ENST00000422795 395 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 PGBD4P3-201ENST00000440731 581 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 MTND6P13-201ENST00000443510 523 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC89Q8N998 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC89Q8N998 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC89Q8N998 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC89Q8N998 AL583843.1-201ENST00000456070 346 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 FTH1P2-201ENST00000466086 412 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 AL358832.1-201ENST00000497800 389 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC89Q8N998 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC89Q8N998 RNU2-46P-201ENST00000517038 113 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 AP005902.1-201ENST00000521358 186 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 AC022616.3-201ENST00000523940 148 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 OR5AQ1P-201ENST00000527596 927 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 HPRT1P3-201ENST00000539521 576 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 MIR3605-201ENST00000583214 100 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 MIR548AB-201ENST00000584917 84 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC89Q8N998 AC126118.1-201ENST00000607744 628 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 U6.42-201ENST00000618440 107 ntBASIC2.95□□□□□ -1.94
CCDC89Q8N998 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CCDC89Q8N998 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC89Q8N998 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC89Q8N998 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC89Q8N998 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC89Q8N998 RNA5SP125-201ENST00000364843 120 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 RNU6-851P-201ENST00000384565 107 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC127391.1-201ENST00000411737 98 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AL160275.3-201ENST00000423876 471 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC89Q8N998 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC89Q8N998 RPL7P12-201ENST00000446719 750 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC011005.2-201ENST00000487324 359 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC89Q8N998 Y_RNA.717-201ENST00000517106 92 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 FAM92A1P1-201ENST00000528023 890 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC079598.5-201ENST00000547460 117 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC89Q8N998 AL133241.1-201ENST00000556832 487 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC092325.1-201ENST00000566449 554 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 MIR4446-201ENST00000578505 67 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 MIR3915-201ENST00000578518 97 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC005771.1-201ENST00000585581 349 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC89Q8N998 AL133173.2-201ENST00000614270 90 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC092656.1-203ENST00000624134 423 ntBASIC2.94□□□□□ -1.94
CCDC89Q8N998 AC007494.3-201ENST00000624660 743 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms