Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
ARHGEF39Q8N4T4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ARHGEF39Q8N4T4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ARHGEF39Q8N4T4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 USP8P1-201ENST00000494673 3183 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 Y_RNA.210-201ENST00000364161 110 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 Y_RNA.526-201ENST00000384572 110 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 RNA5SP129-201ENST00000410276 118 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 AC092047.1-201ENST00000424997 240 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 MTND3P9-201ENST00000429526 346 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 RPS3AP12-201ENST00000443616 753 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 RPS3AP46-201ENST00000448352 682 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 CHEK2P4-201ENST00000450340 246 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 AC008958.1-201ENST00000511047 682 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 RNA5SP49-201ENST00000516450 115 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 RNA5SP360-201ENST00000516555 118 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 Y_RNA.715-201ENST00000517082 110 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 AC010186.2-204ENST00000537668 439 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 AC136624.4-201ENST00000573044 370 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 MIR5696-201ENST00000578474 85 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 VN1R91P-201ENST00000594377 169 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 AL590392.1-201ENST00000604960 446 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 MIR3653-201ENST00000625572 110 ntBASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ARHGEF39Q8N4T4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AC118273.1-201ENST00000525324 3006 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 MFSD8-242ENST00000641690 4199 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RNU6-428P-201ENST00000362942 107 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 Y_RNA.106-201ENST00000363189 100 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RNU6-595P-201ENST00000363944 107 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RNU6-1318P-201ENST00000365389 103 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RNA5SP22-201ENST00000365393 109 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 U3.42-201ENST00000408746 214 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 MIR1911-201ENST00000410783 80 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RPL23AP26-201ENST00000412728 464 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RPL17P36-201ENST00000420302 549 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AL358472.1-201ENST00000431295 329 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AL512844.2-201ENST00000433990 593 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 OSTCP8-201ENST00000445117 448 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AL645939.1-201ENST00000453429 797 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AC013470.1-201ENST00000453438 462 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AC010618.1-201ENST00000469924 477 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AC109327.1-201ENST00000471666 403 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RPL22P13-201ENST00000493291 347 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RPL30P5-201ENST00000494923 336 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AC093852.1-201ENST00000503587 266 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AL592156.1-201ENST00000508758 304 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RNA5SP73-201ENST00000516744 108 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RNA5SP468-201ENST00000516782 93 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 RNU6-1271P-201ENST00000517049 105 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AP003730.1-201ENST00000524605 285 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 CYCSP29-201ENST00000533731 318 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AC005476.1-201ENST00000554427 397 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 HSPE1P5-201ENST00000561489 272 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 ZNF192P1-203ENST00000565888 810 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 FAM27D1-201ENST00000612308 341 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 U2.1-201ENST00000618978 145 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 AL023881.1-201ENST00000621088 301 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 MIR6830-201ENST00000636015 70 ntBASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
ARHGEF39Q8N4T4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.09□□□□□ -1.76
ARHGEF39Q8N4T4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
ARHGEF39Q8N4T4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
ARHGEF39Q8N4T4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
ARHGEF39Q8N4T4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.09□□□□□ -1.76
ARHGEF39Q8N4T4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ARHGEF39Q8N4T4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.09□□□□□ -1.76
ARHGEF39Q8N4T4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
ARHGEF39Q8N4T4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ARHGEF39Q8N4T4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ARHGEF39Q8N4T4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
ARHGEF39Q8N4T4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
ARHGEF39Q8N4T4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
ARHGEF39Q8N4T4 SNORA31-201ENST00000362607 130 ntBASIC4.08□□□□□ -1.76
ARHGEF39Q8N4T4 RNU1-14P-201ENST00000362759 152 ntBASIC4.08□□□□□ -1.76
ARHGEF39Q8N4T4 RNA5SP175-201ENST00000364275 119 ntBASIC4.08□□□□□ -1.76
ARHGEF39Q8N4T4 Y_RNA.476-201ENST00000384347 108 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms