Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 RNA5SP51-201ENST00000364750 119 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 RNU4-66P-201ENST00000365199 138 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 RNU6-1027P-201ENST00000383998 107 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 SNORA75B-201ENST00000384053 137 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 MIR218-2-201ENST00000385006 110 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 MT-TL1-201ENST00000386347 75 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AL356057.2-201ENST00000403318 432 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 RPL5P18-201ENST00000406671 891 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 OR9R1P-201ENST00000412200 877 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AC138393.2-201ENST00000414742 246 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 ARL5AP1-201ENST00000418991 388 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 RPL30P16-201ENST00000419341 429 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AC073063.1-201ENST00000434352 607 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 MTND3P16-201ENST00000452205 344 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 RPS29P25-201ENST00000481709 171 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AC006483.1-201ENST00000487308 313 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AC110768.1-201ENST00000509222 400 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AC025465.4-201ENST00000513422 638 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 RNU6-1183P-201ENST00000517054 60 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AF235103.2-201ENST00000525753 346 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AC060780.3-201ENST00000589464 80 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AC012119.1-201ENST00000603184 222 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 AC024614.3-201ENST00000637860 256 ntBASIC3.82□□□□□ -1.8
CHPFQ8IZ52 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHPFQ8IZ52 HSPA8P1-201ENST00000425843 1833 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 OR4G1P-203ENST00000641984 1631 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 MIR423-201ENST00000362201 94 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 SNORA72.1-201ENST00000363485 129 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 CD24P4-201ENST00000382840 243 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 Y_RNA.399-201ENST00000383955 105 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 RNU6-38P-201ENST00000384085 107 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 MIR34B-201ENST00000385076 84 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 Y_RNA.623-201ENST00000411128 95 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AL353621.1-201ENST00000418219 243 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 BPY2DP-201ENST00000422208 265 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AL627311.1-201ENST00000431514 115 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AL583843.1-201ENST00000456070 346 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 RNU6-333P-201ENST00000459117 107 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 RPL21P99-201ENST00000480369 423 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 MIR3941-201ENST00000582572 103 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AC073539.2-201ENST00000597113 165 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AL645944.1-201ENST00000603857 493 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AC022418.1-201ENST00000624118 445 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 AC110491.1-201ENST00000562191 2010 ntBASIC3.81□□□□□ -1.8
CHPFQ8IZ52 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHPFQ8IZ52 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CHPFQ8IZ52 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHPFQ8IZ52 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.8□□□□□ -1.8
CHPFQ8IZ52 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHPFQ8IZ52 MFSD8-236ENST00000641509 4050 ntBASIC3.8□□□□□ -1.8
CHPFQ8IZ52 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHPFQ8IZ52 RNA5SP72-201ENST00000364442 117 ntBASIC3.8□□□□□ -1.8
CHPFQ8IZ52 RNU6-166P-201ENST00000384371 107 ntBASIC3.8□□□□□ -1.8
CHPFQ8IZ52 SNORA16.2-201ENST00000390991 127 ntBASIC3.8□□□□□ -1.8
CHPFQ8IZ52 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.8□□□□□ -1.8
CHPFQ8IZ52 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.8□□□□□ -1.8
CHPFQ8IZ52 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.8□□□□□ -1.8
CHPFQ8IZ52 RHEBP3-201ENST00000411920 351 ntBASIC3.8□□□□□ -1.8
CHPFQ8IZ52 ATP5A1P2-201ENST00000412323 255 ntBASIC3.8□□□□□ -1.8
CHPFQ8IZ52 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.8□□□□□ -1.8
CHPFQ8IZ52 RPL23AP83-201ENST00000434984 473 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms