Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL031667.3-201ENST00000620124 655 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AL391262.2-201ENST00000622466 494 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 AC010149.2-201ENST00000637608 315 ntBASIC2.34□□□□□ -2.03
CCDC65Q8IXS2 CKAP2P1-201ENST00000555477 2049 ntBASIC2.34□□□□□ -2.04
CCDC65Q8IXS2 Y_RNA.46-201ENST00000362695 102 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 RNU5A-8P-201ENST00000364102 114 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 Y_RNA.245-201ENST00000364493 95 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 RN7SKP226-201ENST00000364912 300 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 MIR17-201ENST00000385012 84 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 RNU6-750P-201ENST00000390946 107 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 RNU2-49P-201ENST00000410666 184 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 RPS24P7-201ENST00000416921 246 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 ZNF90P2-204ENST00000419323 1075 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 TIMM9P1-201ENST00000436122 256 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AC098591.2-201ENST00000510152 315 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AP006587.4-201ENST00000526053 529 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AP000403.1-201ENST00000603349 851 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AC025588.2-201ENST00000604851 466 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AC021755.4-201ENST00000616620 456 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AP002782.1-201ENST00000623107 614 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 CENPCP1-201ENST00000533085 2578 ntBASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC65Q8IXS2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 RNU6-1284P-201ENST00000363701 100 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 RNU6-660P-201ENST00000364566 109 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 RNA5SP425-201ENST00000410336 112 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 Z98742.3-201ENST00000418637 326 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 GDI2P2-201ENST00000445131 608 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 MTCO1P42-201ENST00000457379 726 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AC010486.1-201ENST00000511793 424 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 RNU6-1003P-201ENST00000517099 105 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 RNA5SP165-201ENST00000517142 115 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AC090888.2-201ENST00000559765 1144 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AC002984.1-201ENST00000591692 448 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AL355877.2-201ENST00000603670 358 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AC105148.1-201ENST00000604961 409 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 OR10AB1P-201ENST00000609613 938 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AL589743.7-201ENST00000612637 233 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AC098657.3-201ENST00000620434 263 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 AC064859.1-201ENST00000624741 174 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 MTND5P29-201ENST00000458676 1807 ntBASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC65Q8IXS2 MIR23A-201ENST00000385245 73 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 RPS20P2-201ENST00000402520 389 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC098831.1-201ENST00000440661 216 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 RNA5SP233-201ENST00000459153 113 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC025755.1-201ENST00000521306 278 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AL356432.3-201ENST00000568952 465 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 MIR4448-201ENST00000584360 86 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC010378.1-201ENST00000619270 362 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AL162373.1-201ENST00000620433 407 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 MIR7515-201ENST00000637837 67 ntBASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC65Q8IXS2 AC110491.1-201ENST00000562191 2010 ntBASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC65Q8IXS2 RNU6-188P-201ENST00000364207 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms