Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SNORA59A-201ENST00000459326 152 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 AC126389.1-201ENST00000477436 290 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNA5SP320-201ENST00000516263 124 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNA5SP148-201ENST00000516527 94 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNA5SP165-201ENST00000517142 115 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 CKS1BP7-201ENST00000522230 235 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 AC234778.2-201ENST00000566241 354 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 AC073544.2-201ENST00000601155 540 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 NRBF2P5-201ENST00000603087 788 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 MTND4LP5-201ENST00000605152 292 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 AP002360.4-201ENST00000606980 481 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 CU459211.1-201ENST00000635667 749 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 TEX21P-201ENST00000447107 1476 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 FARSBP1-201ENST00000435808 1778 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AL359693.1-201ENST00000614959 2407 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC073343.1-201ENST00000328239 651 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 MIR6073-201ENST00000352083 89 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 Y_RNA.77-201ENST00000362962 107 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 Y_RNA.201-201ENST00000364052 96 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-946P-201ENST00000383878 107 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-39P-201ENST00000384344 107 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 MIR888-201ENST00000401186 77 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC080125.1-201ENST00000414888 684 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 ISCA1P6-201ENST00000427740 390 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC009961.2-201ENST00000435771 251 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 FABP5P15-201ENST00000453566 214 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 RPL31P3-201ENST00000458430 332 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 UBE2DNL-203ENST00000474922 222 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 RAC1P5-201ENST00000512182 576 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 Vault.3-201ENST00000516676 95 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC022616.3-201ENST00000523940 148 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 HMGN2P15-201ENST00000585707 270 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC040904.1-201ENST00000590850 223 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC090578.1-201ENST00000604955 591 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AL365204.3-201ENST00000612448 685 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 AC110079.1-202ENST00000635213 138 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 MTND5P42-201ENST00000637720 498 ntBASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
C9orf40Q8IXQ3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 CR848007.1-201ENST00000442354 1699 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 SNORD116-1-201ENST00000384335 95 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 MIR518C-201ENST00000384822 101 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-248P-201ENST00000410720 107 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RNU2-68P-201ENST00000410878 191 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RPS12P24-201ENST00000412619 387 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AL365496.1-201ENST00000426885 215 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RPL36AP53-201ENST00000432891 316 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RPS24P1-201ENST00000438550 371 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 MTND2P22-201ENST00000444325 1033 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 USP9YP29-201ENST00000445112 563 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 MTATP6P26-201ENST00000445926 662 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AL136380.1-201ENST00000447970 162 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 MTND1P27-201ENST00000451117 902 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RPL26P9-201ENST00000457466 433 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-956P-201ENST00000458868 103 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RPS29P12-201ENST00000460178 152 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 MRPS17P3-201ENST00000465453 385 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AP000852.1-201ENST00000472460 573 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AC126182.1-201ENST00000478134 357 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AC007182.2-201ENST00000489251 402 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RPS29P20-201ENST00000489592 171 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RPL39P36-201ENST00000490784 156 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RN7SKP24-201ENST00000515888 284 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 SNORA18.6-201ENST00000516792 115 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-677P-201ENST00000516914 101 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms