Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-381P-201ENST00000391259 108 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 RPL21P67-201ENST00000402896 478 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 COX5BP7-201ENST00000414780 274 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC009296.1-201ENST00000443146 155 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC009963.2-201ENST00000453431 138 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 RPL10P17-201ENST00000453852 316 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC146944.2-203ENST00000502493 354 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC139495.1-202ENST00000513164 354 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 FTH1P11-201ENST00000517577 551 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC023575.1-201ENST00000580510 358 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC069294.1-201ENST00000608397 350 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 SNORD91B-202ENST00000608459 222 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 uc_338.28-201ENST00000612082 187 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC106754.2-201ENST00000623006 233 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC090617.7-201ENST00000623952 126 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AP001340.1-201ENST00000624405 217 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 U6.95-201ENST00000636931 70 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC139713.2-214ENST00000642059 1811 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 AC134026.1-201ENST00000623249 2239 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 SRP72P2-201ENST00000344851 1979 ntBASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPAS3Q8IXF0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 MUC2-202ENST00000613187 4845 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 RNU6-227P-201ENST00000362865 103 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 RNU6-915P-201ENST00000364943 103 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 RNU4-9P-201ENST00000364951 139 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 SNORD51-201ENST00000384320 80 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 Y_RNA.558-201ENST00000384685 113 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 ELOCP19-201ENST00000411919 318 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 HMGB1P27-201ENST00000431429 603 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 AL121594.1-201ENST00000475906 575 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 AC012158.1-204ENST00000483430 465 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 AC022493.1-201ENST00000492984 337 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 RPL36AP41-201ENST00000493820 306 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 AC005912.1-201ENST00000495392 255 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 TOMM20P2-201ENST00000540082 421 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 CR383656.7-201ENST00000548164 174 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 AC005176.2-201ENST00000596933 147 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 ADAM5-202ENST00000399789 1942 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 SMG1P7-201ENST00000565246 2704 ntBASIC5.03□□□□□ -1.6
NPAS3Q8IXF0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
NPAS3Q8IXF0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 AC104623.2-202ENST00000623477 4002 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 RNU6-428P-201ENST00000362942 107 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 SNORA73.1-201ENST00000363107 205 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 RNU6-741P-201ENST00000383889 107 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 MIR32-201ENST00000384965 70 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 AL117339.3-201ENST00000418733 162 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 GNG5P5-201ENST00000420444 220 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 RPL7AP61-201ENST00000443410 636 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 snoU13.7-201ENST00000459220 104 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 RPL23AP45-201ENST00000476406 468 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 RPS15AP34-201ENST00000487776 387 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 RN7SKP122-201ENST00000515923 296 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 TRAV37-201ENST00000553906 342 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 AL670379.3-201ENST00000605040 251 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 AC062037.1-201ENST00000605302 128 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 RNU6-84P-201ENST00000607737 102 ntBASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 RMST_4.1-201ENST00000616886 107 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms