Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 HMGN2P30-201ENST00000423237 256 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AL592045.1-201ENST00000429867 352 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 MTND1P18-201ENST00000448191 573 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AC010099.1-201ENST00000455434 375 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 RPS4XP2-201ENST00000458402 793 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AC021205.2-201ENST00000480069 347 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AC104806.1-201ENST00000508720 308 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 RNU6-123P-201ENST00000516163 102 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 RNU6-914P-201ENST00000516749 109 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 MTND1P5-201ENST00000517906 940 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AP001893.2-201ENST00000526949 202 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 GTF3AP2-201ENST00000557014 266 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 ZNF519P2-201ENST00000557032 169 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AL355598.1-201ENST00000604169 202 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AL670379.4-201ENST00000605279 254 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AC017083.3-201ENST00000609955 700 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 uc_338.1-201ENST00000612113 180 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 DUSP12P1-201ENST00000612874 516 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AL157786.1-207ENST00000627771 695 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 Z99571.1-201ENST00000636677 394 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AC093010.3-201ENST00000570269 15214 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 ZNF680P1-201ENST00000436625 1469 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 MTND5P7-201ENST00000413558 1798 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AC000403.1-201ENST00000613696 3585 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 SNORA71.1-201ENST00000364523 117 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 SNORA54-201ENST00000384281 123 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AC099548.1-201ENST00000421443 426 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 MTCO2P19-201ENST00000427513 598 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 RPS24P13-201ENST00000442520 397 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 ELOCP23-201ENST00000452014 332 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AL356010.1-201ENST00000456364 102 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 RNU7-63P-201ENST00000459054 62 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AP002884.2-201ENST00000471647 395 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 RN7SL442P-201ENST00000473804 320 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AC091826.1-201ENST00000514065 313 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 RNU6-314P-201ENST00000516574 104 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 MIR4775-201ENST00000581168 75 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AL391646.1-201ENST00000603860 190 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AL138889.2-201ENST00000603883 242 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 MIR15A-201ENST00000607334 83 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AP001486.3-201ENST00000615334 372 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 SNORD39.4-201ENST00000620099 78 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AC139792.3-201ENST00000623525 224 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AP003122.6-201ENST00000623831 495 ntBASIC3.44□□□□□ -1.86
HERC6Q8IVU3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HERC6Q8IVU3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HERC6Q8IVU3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HERC6Q8IVU3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HERC6Q8IVU3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.43□□□□□ -1.86
HERC6Q8IVU3 RNU1-75P-201ENST00000347264 129 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 RNU6-1085P-201ENST00000363576 107 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 Y_RNA.159-201ENST00000363674 87 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 SNORD115-7-201ENST00000365306 82 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 RNU6-198P-201ENST00000384258 104 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 RPS4XP8-201ENST00000402039 771 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 RN7SKP220-201ENST00000410611 288 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 AC092809.3-201ENST00000415453 231 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 AL356968.1-201ENST00000416622 474 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 RPL37P4-201ENST00000448908 268 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 RPL12P25-201ENST00000455592 494 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 AL031183.1-201ENST00000457667 207 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.43□□□□□ -1.86
HERC6Q8IVU3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 GMFBP1-201ENST00000467831 427 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.43□□□□□ -1.86
HERC6Q8IVU3 RPL9P33-201ENST00000484311 566 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 AC109927.2-201ENST00000506416 303 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 AL117351.2-201ENST00000513571 157 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 NACAP3-201ENST00000552100 481 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.43□□□□□ -1.86
HERC6Q8IVU3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.43□□□□□ -1.86
HERC6Q8IVU3 AC104984.5-201ENST00000586878 94 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 AC107304.1-201ENST00000604229 296 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 AC008945.2-201ENST00000606056 604 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 MIR622-201ENST00000638396 96 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms