Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VRK3Q8IV63 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.71□□□□□ -1.82
VRK3Q8IV63 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VRK3Q8IV63 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VRK3Q8IV63 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
VRK3Q8IV63 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VRK3Q8IV63 RNU6-989P-201ENST00000362756 107 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 RNU6-701P-201ENST00000384059 107 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VRK3Q8IV63 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 RNU2-3P-201ENST00000410144 191 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 RNU2-23P-201ENST00000410545 195 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 RNU6-55P-201ENST00000411092 107 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.7□□□□□ -1.82
VRK3Q8IV63 MRPS18BP2-201ENST00000434310 759 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.7□□□□□ -1.82
VRK3Q8IV63 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.7□□□□□ -1.82
VRK3Q8IV63 AC010683.1-201ENST00000473673 378 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 AC104564.1-201ENST00000493028 407 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 AC107222.1-201ENST00000510899 637 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 RN7SKP277-201ENST00000516895 283 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VRK3Q8IV63 AC103783.1-201ENST00000520506 373 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 RNU6-323P-201ENST00000521915 107 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 AC007991.1-201ENST00000522680 631 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VRK3Q8IV63 AC026470.2-201ENST00000561492 181 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 SUB1P3-201ENST00000564581 315 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 AC106785.1-201ENST00000565935 262 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.7□□□□□ -1.82
VRK3Q8IV63 BRDTP1-201ENST00000605735 677 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 HMGB1P50-201ENST00000605814 607 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VRK3Q8IV63 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.7□□□□□ -1.82
VRK3Q8IV63 AL359547.2-201ENST00000615810 418 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 U2.1-201ENST00000618978 145 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VRK3Q8IV63 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VRK3Q8IV63 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VRK3Q8IV63 AC032011.1-201ENST00000611703 1549 ntBASIC3.7□□□□□ -1.82
VRK3Q8IV63 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VRK3Q8IV63 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VRK3Q8IV63 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VRK3Q8IV63 RNU6-874P-201ENST00000362390 105 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VRK3Q8IV63 RNU6-101P-201ENST00000410323 104 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 RPL21P109-201ENST00000422213 475 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.69□□□□□ -1.82
VRK3Q8IV63 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.69□□□□□ -1.82
VRK3Q8IV63 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.69□□□□□ -1.82
VRK3Q8IV63 BTF3L4P4-201ENST00000506381 449 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.69□□□□□ -1.82
VRK3Q8IV63 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
VRK3Q8IV63 AC092436.3-201ENST00000511788 257 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 RNY3P15-201ENST00000516297 97 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 RNU6-307P-201ENST00000516743 106 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 IGKV2D-23-201ENST00000518179 286 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 AC022616.4-201ENST00000522985 181 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.69□□□□□ -1.82
VRK3Q8IV63 AC005899.2-201ENST00000584353 90 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 AL031176.1-201ENST00000604554 466 ntBASIC3.69□□□□□ -1.82
VRK3Q8IV63 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VRK3Q8IV63 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.69□□□□□ -1.82
VRK3Q8IV63 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VRK3Q8IV63 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
VRK3Q8IV63 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VRK3Q8IV63 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.68□□□□□ -1.82
VRK3Q8IV63 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VRK3Q8IV63 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VRK3Q8IV63 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
VRK3Q8IV63 Y_RNA.106-201ENST00000363189 100 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 Y_RNA.126-201ENST00000363382 111 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 RNU6-842P-201ENST00000384269 107 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 Y_RNA.485-201ENST00000384395 102 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 Y_RNA.489-201ENST00000384410 101 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 RNU6-306P-201ENST00000384617 107 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 RNU6-14P-201ENST00000384630 106 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 U8.11-201ENST00000384699 133 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 U8.12-201ENST00000384701 133 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VRK3Q8IV63 RNU6-821P-201ENST00000390995 107 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 RNA5SP56-201ENST00000410277 118 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 RN7SKP156-201ENST00000410308 342 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 RNU6-293P-201ENST00000411259 106 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.68□□□□□ -1.82
VRK3Q8IV63 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.68□□□□□ -1.82
VRK3Q8IV63 AL591419.1-201ENST00000427423 339 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 PSMA2P3-201ENST00000429685 675 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 AC099799.1-201ENST00000439809 192 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.68□□□□□ -1.82
VRK3Q8IV63 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.68□□□□□ -1.82
VRK3Q8IV63 AC011816.1-201ENST00000441346 546 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 HMGB3P30-201ENST00000457863 606 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 U8.18-201ENST00000459285 133 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.68□□□□□ -1.82
VRK3Q8IV63 Y_RNA.689-201ENST00000516589 107 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms