Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 U6.114-201ENST00000636407 96 ntBASIC3.85□□□□□ -1.79
KRT28Q7Z3Y7 MIR3688-2-201ENST00000636963 87 ntBASIC3.85□□□□□ -1.79
KRT28Q7Z3Y7 MIR1321-201ENST00000637766 79 ntBASIC3.85□□□□□ -1.79
KRT28Q7Z3Y7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
KRT28Q7Z3Y7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRT28Q7Z3Y7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 RNU6-179P-201ENST00000363350 107 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 SNORA62.1-201ENST00000364287 154 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 RNU4-48P-201ENST00000365559 182 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AL591416.1-201ENST00000404015 867 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 RNA5SP21-201ENST00000410917 96 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 OR51A5P-201ENST00000415429 942 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AL606489.2-201ENST00000433886 234 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 DDX3P2-201ENST00000446138 111 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 RNU7-63P-201ENST00000459054 62 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 MTCO3P38-201ENST00000468910 766 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AP001086.1-201ENST00000494882 321 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AC008549.1-201ENST00000512900 643 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 RNA5SP217-201ENST00000515959 91 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 MTND1P35-201ENST00000526739 508 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AC104383.1-201ENST00000530297 370 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AC068135.2-201ENST00000569293 1028 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 MIR3921-201ENST00000577308 85 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 SNORA59B-202ENST00000578183 701 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 MIR4425-201ENST00000580572 84 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AC007687.1-201ENST00000602704 304 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 DPPA3P3-201ENST00000603842 430 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AC093788.1-201ENST00000609356 927 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AC064859.1-201ENST00000624741 174 ntBASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRT28Q7Z3Y7 AP003122.5-201ENST00000527668 3766 ntBASIC3.84□□□□□ -1.8
KRT28Q7Z3Y7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
KRT28Q7Z3Y7 OR4G2P-202ENST00000641004 1759 ntBASIC3.84□□□□□ -1.8
KRT28Q7Z3Y7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 SDAD1P2-201ENST00000441308 2028 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 Y_RNA.256-201ENST00000364594 104 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 MIR184-201ENST00000384962 84 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 MIR514A1-201ENST00000385133 98 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 MIR454-201ENST00000390180 115 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 MIR1277-201ENST00000408536 78 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AC114491.1-201ENST00000416095 246 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 BX679664.1-201ENST00000434429 253 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 NEFMP1-201ENST00000443423 1006 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 FABP5P13-201ENST00000452144 328 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 RNU7-182P-201ENST00000459009 62 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AP002884.2-201ENST00000471647 395 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 VN1R17P-201ENST00000472048 1090 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 RPL36AP51-201ENST00000487216 318 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 RNA5SP24-201ENST00000516478 95 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 OR5AL2P-201ENST00000532185 920 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 MIR3690-201ENST00000580266 75 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AL354950.2-201ENST00000617939 290 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 AC093648.1-201ENST00000623546 606 ntBASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.83□□□□□ -1.8
KRT28Q7Z3Y7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 RNU6-946P-201ENST00000383878 107 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 RNU6-606P-201ENST00000384721 111 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 MIR1290-201ENST00000408735 78 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 RNA5SP274-201ENST00000410484 108 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 RNA5SP31-201ENST00000411144 127 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AL356867.1-201ENST00000429623 299 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 HMGB1P27-201ENST00000431429 603 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 RPL36AP6-201ENST00000435770 321 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC020550.1-201ENST00000447385 163 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC010401.1-201ENST00000463867 348 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 RPL21P104-201ENST00000464143 478 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 RN7SL330P-201ENST00000469709 307 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 RPS20P22-201ENST00000473700 357 ntBASIC3.82□□□□□ -1.8
KRT28Q7Z3Y7 AC078785.3-201ENST00000476607 425 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms