Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 CR381572.2-201ENST00000624852 397 ntBASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 AC112200.1-201ENST00000625015 234 ntBASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 MARK2P15-201ENST00000432204 2186 ntBASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 AC015813.6-201ENST00000624409 5808 ntBASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.28□□□□□ -1.72
LRFN4Q6PJG9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 snoU2_19.2-201ENST00000363024 80 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 RNU6-338P-201ENST00000383888 105 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 MIR215-201ENST00000384858 110 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 SNORD96B-201ENST00000386148 79 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AL592291.1-201ENST00000403830 352 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 U3.37-201ENST00000408528 213 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC092047.1-201ENST00000424997 240 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 RPS6P12-201ENST00000432491 726 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 SCARNA10-201ENST00000459255 330 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC022080.3-201ENST00000544433 482 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC026470.2-201ENST00000561492 181 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC093249.4-201ENST00000564755 259 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC090617.3-201ENST00000573670 475 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 MIR4443-201ENST00000585052 53 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC015813.4-201ENST00000610469 179 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 MIR7155-201ENST00000615925 56 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC068870.2-201ENST00000620635 389 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AC233981.2-201ENST00000611524 1614 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 A2MP1-204ENST00000566278 4130 ntBASIC4.27□□□□□ -1.73
LRFN4Q6PJG9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 RNU6-140P-201ENST00000384566 108 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 Y_RNA.539-201ENST00000384635 107 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 Y_RNA.555-201ENST00000384673 110 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 SNORD58.1-201ENST00000391313 66 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 RNA5SP31-201ENST00000411144 127 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AL358453.1-201ENST00000422522 250 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 PIGPP3-201ENST00000425307 415 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 snoU13.30-201ENST00000458951 104 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 RPL31P13-201ENST00000484151 370 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 RNU6-703P-201ENST00000516946 107 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AP004607.1-201ENST00000524456 203 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 DEFB108E-201ENST00000524692 240 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AC044860.2-201ENST00000561005 179 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AC136932.1-201ENST00000574771 208 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 MIR4646-201ENST00000580775 63 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 SCARNA4-201ENST00000629045 128 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 AC009541.1-201ENST00000438279 2662 ntBASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN4Q6PJG9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN4Q6PJG9 NOL8P1-201ENST00000508336 3529 ntBASIC4.25□□□□□ -1.73
LRFN4Q6PJG9 MAPK10-303ENST00000641324 3959 ntBASIC4.25□□□□□ -1.73
LRFN4Q6PJG9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN4Q6PJG9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN4Q6PJG9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.25□□□□□ -1.73
LRFN4Q6PJG9 AL672167.1-203ENST00000641299 2975 ntBASIC4.25□□□□□ -1.73
LRFN4Q6PJG9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN4Q6PJG9 RNY1-201ENST00000364228 113 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms