Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.68□□□□□ -1.82
PPP4R4Q6NUP7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.68□□□□□ -1.82
PPP4R4Q6NUP7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PPP4R4Q6NUP7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PPP4R4Q6NUP7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 MTND4P14-201ENST00000435799 1354 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 SNORA60-201ENST00000362396 134 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 U3.12-201ENST00000364498 214 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 SNORD14B-201ENST00000364533 90 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 RNA5SP283-201ENST00000365604 119 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 RNU2-49P-201ENST00000410666 184 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-1148P-201ENST00000410992 104 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-607P-201ENST00000411283 108 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AC096649.2-201ENST00000416186 393 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AL117339.2-201ENST00000430475 180 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 ERLEC1P1-201ENST00000433806 578 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AL583843.1-201ENST00000456070 346 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 TRBV12-2-201ENST00000489763 344 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AL132838.2-201ENST00000492041 314 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AC091885.1-201ENST00000506658 268 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AC113155.1-201ENST00000511141 769 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 MIR3160-1-201ENST00000577972 85 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 MIR5684-201ENST00000585074 65 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 VN1R85P-201ENST00000601587 426 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AC092807.2-201ENST00000609367 243 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 MIR6867-201ENST00000610636 67 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 RMST_4.1-201ENST00000616886 107 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 MIR6134-201ENST00000617606 109 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 MIR3199-2-201ENST00000636243 86 ntBASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
PPP4R4Q6NUP7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AL356057.2-201ENST00000403318 432 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 RPS4XP7-201ENST00000406274 780 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 Y_RNA.615-201ENST00000410769 117 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC007560.1-201ENST00000426912 237 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 RNU6-1208P-201ENST00000459588 107 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC011005.2-201ENST00000487324 359 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC116353.2-201ENST00000505332 712 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 RN7SKP209-201ENST00000516888 304 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC006199.1-201ENST00000548728 219 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 LINC00933-203ENST00000559812 219 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 MIR4738-201ENST00000579134 87 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 BNIP3P25-201ENST00000596023 559 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 MIR6875-201ENST00000617506 72 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 UCA1.1-201ENST00000620952 75 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC006504.8-201ENST00000621046 635 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 MIR6500-201ENST00000622700 86 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC090617.10-201ENST00000624308 134 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 MIR7153-201ENST00000637758 57 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 MIR492-201ENST00000638676 116 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 AC004520.1-201ENST00000608362 1413 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 ZNF519P1-201ENST00000449011 1626 ntBASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PPP4R4Q6NUP7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.82
PPP4R4Q6NUP7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 RNU6-434P-201ENST00000384376 107 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 MIR184-201ENST00000384962 84 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 MIR518D-201ENST00000385014 87 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 RNU6-332P-201ENST00000391193 108 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 SNORA57.1-201ENST00000391227 145 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 RPL32P23-201ENST00000397237 405 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 FGF7P8-201ENST00000402994 292 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 385.8 ms