Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.25□□□□□ -1.73
E4F1Q66K89 AL117187.1-201ENST00000555482 181 ntBASIC4.25□□□□□ -1.73
E4F1Q66K89 MIR1273C-201ENST00000578669 77 ntBASIC4.25□□□□□ -1.73
E4F1Q66K89 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.25□□□□□ -1.73
E4F1Q66K89 AC010205.1-201ENST00000616668 449 ntBASIC4.25□□□□□ -1.73
E4F1Q66K89 AL162373.1-201ENST00000620433 407 ntBASIC4.25□□□□□ -1.73
E4F1Q66K89 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.25□□□□□ -1.73
E4F1Q66K89 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
E4F1Q66K89 AC005183.1-201ENST00000603687 1979 ntBASIC4.25□□□□□ -1.73
E4F1Q66K89 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.25□□□□□ -1.73
E4F1Q66K89 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
E4F1Q66K89 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
E4F1Q66K89 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.24□□□□□ -1.73
E4F1Q66K89 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
E4F1Q66K89 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.24□□□□□ -1.73
E4F1Q66K89 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
E4F1Q66K89 SNORA60-201ENST00000362396 134 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 Y_RNA.33-201ENST00000362591 102 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 RNU6-395P-201ENST00000365662 106 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 RNU6-842P-201ENST00000384269 107 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 Y_RNA.496-201ENST00000384444 101 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 RNU6-1025P-201ENST00000410629 104 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
E4F1Q66K89 AC007919.1-201ENST00000429380 217 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 AC068287.1-201ENST00000430283 295 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 FTH1P25-201ENST00000447665 469 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.24□□□□□ -1.73
E4F1Q66K89 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.24□□□□□ -1.73
E4F1Q66K89 snoU13.4-201ENST00000458916 104 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
E4F1Q66K89 AC105137.1-201ENST00000484355 562 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 RNU1-86P-201ENST00000516108 154 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 SCARNA15.2-201ENST00000516409 127 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 RNU1-107P-201ENST00000516617 154 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 SNORD116.3-201ENST00000517176 78 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 AP003730.1-201ENST00000524605 285 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 COX6CP5-201ENST00000527162 228 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 AC009643.1-201ENST00000532030 391 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.24□□□□□ -1.73
E4F1Q66K89 AC091516.1-201ENST00000549191 703 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.24□□□□□ -1.73
E4F1Q66K89 AC008269.2-201ENST00000561915 1105 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.24□□□□□ -1.73
E4F1Q66K89 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.24□□□□□ -1.73
E4F1Q66K89 AC005899.2-201ENST00000584353 90 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.24□□□□□ -1.73
E4F1Q66K89 AL160281.1-201ENST00000605307 311 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 AP002826.1-201ENST00000608835 315 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 MIR6730-201ENST00000622213 67 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.24□□□□□ -1.73
E4F1Q66K89 MAPK10-372ENST00000641954 3413 ntBASIC4.24□□□□□ -1.73
E4F1Q66K89 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
E4F1Q66K89 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
E4F1Q66K89 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
E4F1Q66K89 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.23□□□□□ -1.73
E4F1Q66K89 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.23□□□□□ -1.73
E4F1Q66K89 TNPO1P3-201ENST00000436471 2662 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.23□□□□□ -1.73
E4F1Q66K89 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
E4F1Q66K89 AC126755.2-208ENST00000327792 462 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 AC138969.1-213ENST00000331436 462 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
E4F1Q66K89 RNA5SP130-201ENST00000364431 114 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 AC096664.2-201ENST00000411843 406 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 AC016397.1-201ENST00000412463 242 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 SYF2P2-201ENST00000417620 583 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 CYP4F29P-201ENST00000420685 446 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.23□□□□□ -1.73
E4F1Q66K89 AL158156.1-201ENST00000422509 473 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 RPL27AP8-201ENST00000424277 446 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 UBE2D3P2-201ENST00000424409 445 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 DNAJC19P7-201ENST00000428811 344 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 RPS24P13-201ENST00000442520 397 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 RPS29P31-201ENST00000446147 164 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 RPS24P6-201ENST00000452670 400 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.23□□□□□ -1.73
E4F1Q66K89 AC008571.1-201ENST00000467232 300 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.23□□□□□ -1.73
E4F1Q66K89 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.23□□□□□ -1.73
E4F1Q66K89 MIR892C-201ENST00000516410 77 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.23□□□□□ -1.73
E4F1Q66K89 HIGD1AP5-201ENST00000529959 259 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 TRAV37-201ENST00000553906 342 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.23□□□□□ -1.73
E4F1Q66K89 MIR3921-201ENST00000577308 85 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.23□□□□□ -1.73
E4F1Q66K89 ARF4P1-201ENST00000605447 541 ntBASIC4.23□□□□□ -1.73
E4F1Q66K89 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.23□□□□□ -1.73
E4F1Q66K89 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
E4F1Q66K89 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
E4F1Q66K89 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.23□□□□□ -1.73
E4F1Q66K89 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
E4F1Q66K89 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.23□□□□□ -1.73
E4F1Q66K89 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
E4F1Q66K89 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.22□□□□□ -1.73
E4F1Q66K89 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
E4F1Q66K89 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.22□□□□□ -1.73
E4F1Q66K89 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
E4F1Q66K89 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.22□□□□□ -1.73
E4F1Q66K89 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms