Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC117440.1-201ENST00000474107 571 ntBASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 AC105252.1-201ENST00000503089 286 ntBASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 RNU6-703P-201ENST00000516946 107 ntBASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 AL157871.3-201ENST00000557231 293 ntBASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 MIR1273C-201ENST00000578669 77 ntBASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 AL451007.1-201ENST00000595491 289 ntBASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 AL355877.2-201ENST00000603670 358 ntBASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 MIR15A-201ENST00000607334 83 ntBASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 U6.114-201ENST00000636407 96 ntBASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX30Q5VWJ9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 RNU6-181P-201ENST00000363225 107 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 Y_RNA.359-201ENST00000365498 102 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 U8.9-201ENST00000365667 134 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 RNU6-658P-201ENST00000384606 106 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 MIR887-201ENST00000401258 79 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 BTF3L4P1-201ENST00000413813 468 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC114491.1-201ENST00000416095 246 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 SKA2P1-201ENST00000425592 390 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC098614.2-201ENST00000426040 255 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AL358075.3-201ENST00000426289 226 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC107083.1-201ENST00000439643 279 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 RPL21P2-201ENST00000440049 481 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC079448.1-201ENST00000449377 373 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC097462.2-201ENST00000504623 481 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 RNU6-445P-201ENST00000516949 107 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 OR4R1P-201ENST00000529879 463 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC022080.3-201ENST00000544433 482 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 EIF4BP1-201ENST00000554881 351 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC024619.4-201ENST00000580924 316 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AL035413.2-201ENST00000604801 525 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AL121992.2-201ENST00000606262 256 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC013562.2-201ENST00000611632 603 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 MIR3199-2-201ENST00000636243 86 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 AC000403.1-201ENST00000613696 3585 ntBASIC3.16□□□□□ -1.9
SNX30Q5VWJ9 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SNX30Q5VWJ9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 Y_RNA.33-201ENST00000362591 102 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 Y_RNA.367-201ENST00000365544 101 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 MIR454-201ENST00000390180 115 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 MIR1289-1-201ENST00000408836 144 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 USP9YP6-201ENST00000413550 854 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC096649.2-201ENST00000416186 393 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 GTF2IP20-201ENST00000431663 360 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 MTATP6P16-201ENST00000434543 526 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 RPS15AP27-201ENST00000449183 343 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 RPS29P20-201ENST00000489592 171 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC009901.1-201ENST00000506703 541 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 RNU6-123P-201ENST00000516163 102 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC009812.2-201ENST00000517657 457 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 MIR4782-201ENST00000577987 79 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC098614.4-201ENST00000607601 462 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 ATP5A1P2-202ENST00000616464 443 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 UCA1.1-201ENST00000620952 75 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC090617.7-201ENST00000623952 126 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AC009161.2-201ENST00000624626 138 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 AL157786.1-207ENST00000627771 695 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 U6.99-201ENST00000637524 83 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 LRRC77P-213ENST00000637727 880 ntBASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNX30Q5VWJ9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNX30Q5VWJ9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms