Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VARS2Q5ST30 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VARS2Q5ST30 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.75□□□□□ -1.49
VARS2Q5ST30 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VARS2Q5ST30 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.75□□□□□ -1.49
VARS2Q5ST30 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VARS2Q5ST30 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.74□□□□□ -1.49
VARS2Q5ST30 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VARS2Q5ST30 AL359693.1-201ENST00000614959 2407 ntBASIC5.74□□□□□ -1.49
VARS2Q5ST30 RNU6-508P-201ENST00000363231 103 ntBASIC5.74□□□□□ -1.49
VARS2Q5ST30 RNU6-309P-201ENST00000364573 106 ntBASIC5.74□□□□□ -1.49
VARS2Q5ST30 Y_RNA.323-201ENST00000365157 109 ntBASIC5.74□□□□□ -1.49
VARS2Q5ST30 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VARS2Q5ST30 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VARS2Q5ST30 Y_RNA.593-201ENST00000410292 98 ntBASIC5.74□□□□□ -1.49
VARS2Q5ST30 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VARS2Q5ST30 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.74□□□□□ -1.49
VARS2Q5ST30 RN7SL188P-201ENST00000469842 285 ntBASIC5.74□□□□□ -1.49
VARS2Q5ST30 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.74□□□□□ -1.49
VARS2Q5ST30 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.74□□□□□ -1.49
VARS2Q5ST30 MIR4330-201ENST00000579077 105 ntBASIC5.74□□□□□ -1.49
VARS2Q5ST30 MIR2052-201ENST00000636055 55 ntBASIC5.74□□□□□ -1.49
VARS2Q5ST30 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.74□□□□□ -1.49
VARS2Q5ST30 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VARS2Q5ST30 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
VARS2Q5ST30 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
VARS2Q5ST30 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.74□□□□□ -1.49
VARS2Q5ST30 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VARS2Q5ST30 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VARS2Q5ST30 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARS2Q5ST30 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VARS2Q5ST30 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.73□□□□□ -1.49
VARS2Q5ST30 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARS2Q5ST30 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VARS2Q5ST30 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARS2Q5ST30 MIR367-201ENST00000362299 68 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 RNU6-978P-201ENST00000364371 103 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 Y_RNA.368-201ENST00000365547 113 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 RNU1-106P-201ENST00000384382 164 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 ADAM24P-201ENST00000398655 2101 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 RN7SKP17-201ENST00000411242 351 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 FABP5P15-201ENST00000453566 214 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.73□□□□□ -1.49
VARS2Q5ST30 RNU7-141P-201ENST00000459304 62 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 AC092754.1-201ENST00000472975 479 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.73□□□□□ -1.49
VARS2Q5ST30 MIR5571-201ENST00000577998 113 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 POLR3GP1-201ENST00000594073 261 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.73□□□□□ -1.49
VARS2Q5ST30 MIR378J-201ENST00000611988 109 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 Y_RNA.818-201ENST00000618813 71 ntBASIC5.73□□□□□ -1.49
VARS2Q5ST30 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VARS2Q5ST30 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VARS2Q5ST30 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VARS2Q5ST30 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
VARS2Q5ST30 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VARS2Q5ST30 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VARS2Q5ST30 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.72□□□□□ -1.49
VARS2Q5ST30 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.72□□□□□ -1.49
VARS2Q5ST30 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARS2Q5ST30 AC092268.1-201ENST00000342691 405 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 SNORA79-201ENST00000408376 140 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 RNU6-710P-201ENST00000410424 105 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 RPL23AP95-201ENST00000426806 265 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 AC091390.1-201ENST00000433904 331 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 AC243964.1-201ENST00000441814 261 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 snoU109.2-201ENST00000459316 135 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 RPL21P10-201ENST00000463521 490 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 BX284632.1-201ENST00000478218 541 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 RPL31P13-201ENST00000484151 370 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 SNORA31.19-201ENST00000517079 126 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 RNA5SP373-201ENST00000517271 95 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 SCARNA4-202ENST00000625402 129 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.72□□□□□ -1.49
VARS2Q5ST30 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VARS2Q5ST30 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.72□□□□□ -1.49
VARS2Q5ST30 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARS2Q5ST30 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.72□□□□□ -1.49
VARS2Q5ST30 AC080128.1-201ENST00000474389 1917 ntBASIC5.72□□□□□ -1.49
VARS2Q5ST30 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARS2Q5ST30 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARS2Q5ST30 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARS2Q5ST30 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.71□□□□□ -1.49
VARS2Q5ST30 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
VARS2Q5ST30 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VARS2Q5ST30 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VARS2Q5ST30 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VARS2Q5ST30 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VARS2Q5ST30 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
VARS2Q5ST30 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.71□□□□□ -1.5
VARS2Q5ST30 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VARS2Q5ST30 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VARS2Q5ST30 AC114774.1-201ENST00000507410 1770 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 AL360270.2-201ENST00000562952 5985 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 RNU6-527P-201ENST00000363425 104 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 U3.10-201ENST00000364459 214 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 SNORD32A-201ENST00000364805 84 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 RNU6-144P-201ENST00000383951 107 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 MIR590-201ENST00000385008 97 ntBASIC5.71□□□□□ -1.5
VARS2Q5ST30 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms