Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CUL1P1-201ENST00000509510 2425 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 AL450326.2-201ENST00000421913 1962 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 AC026523.2-201ENST00000625039 7739 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 AL450345.1-202ENST00000605741 3881 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 AC008555.8-201ENST00000623602 2168 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 MTND5P35-201ENST00000557537 1720 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 MIR450A1-201ENST00000362262 91 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 RNU4-80P-201ENST00000363200 141 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 RNU6-961P-201ENST00000363893 105 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 SNORA70F-201ENST00000384142 135 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 U3.22-201ENST00000391120 215 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 BX510359.2-201ENST00000417920 305 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 AC104333.2-201ENST00000422630 192 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 RPS27AP12-201ENST00000429552 465 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 COX6B1P7-201ENST00000430845 235 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 AL591623.2-201ENST00000449978 222 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 AURKAPS2-201ENST00000454983 333 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 RN7SL41P-201ENST00000476144 297 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 RPL21P13-201ENST00000488305 481 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 RN7SKP276-201ENST00000516242 268 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 Y_RNA.677-201ENST00000516401 85 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 AC010928.2-201ENST00000588017 287 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 SRGNP1-201ENST00000603392 451 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 SNORD91B-202ENST00000608459 222 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 MIR6839-201ENST00000620425 113 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 AC069528.2-201ENST00000624849 1991 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 AP001642.1-201ENST00000624727 2117 ntBASIC5.32□□□□□ -1.56
CTC1Q2NKJ3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 Y_RNA.116-201ENST00000363292 103 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RNU6-32P-201ENST00000383948 107 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RNU6-17P-201ENST00000384245 107 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RNU6-13P-201ENST00000384248 107 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RNU6-18P-201ENST00000384527 107 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RNU6-12P-201ENST00000384604 107 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RNU6-41P-201ENST00000384741 107 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 SNORA12.1-201ENST00000390873 148 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RNU6-1275P-201ENST00000391087 107 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 MIR1193-201ENST00000408109 78 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 ELOCP19-201ENST00000411919 318 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AL391219.1-201ENST00000422570 483 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AC005154.2-201ENST00000438110 379 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RPL7AP28-201ENST00000464513 571 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AC022493.1-201ENST00000492984 337 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 RNU6-191P-201ENST00000516295 94 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AC107918.3-201ENST00000533272 382 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AP001880.2-201ENST00000538233 448 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 NDUFA5P6-201ENST00000542110 379 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 MIR3145-201ENST00000580727 82 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AC060766.3-201ENST00000591442 263 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AC068724.3-201ENST00000625906 87 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 FAM91A3P-201ENST00000456826 2544 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AC099654.2-201ENST00000433031 1980 ntBASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.31□□□□□ -1.56
CTC1Q2NKJ3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 Y_RNA.534-201ENST00000384599 112 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 SNORA68.2-201ENST00000391263 128 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms